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Gp9 Gene Detail
Summary
  • Symbol
    Gp9
  • Name
    glycoprotein 9 platelet
  • Synonyms
    Cd42, GPIX
  • Feature Type
    protein coding gene
  • IDs
    MGI:1860137
    NCBI Gene: 54368
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:87755054-87756750 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 39.13 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    164 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1860137
 protein coding gene Chr6:87753115-87756768 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030997
 protein coding gene Chr6:89142987-89144683 (+)
A/J MGP_AJ_G0030963
 protein coding gene Chr6:85702113-85703809 (+)
AKR/J MGP_AKRJ_G0030894
 protein coding gene Chr6:88182041-88183737 (+)
BALB/cJ MGP_BALBcJ_G0030976
 protein coding gene Chr6:85697880-85699576 (+)
C3H/HeJ MGP_C3HHeJ_G0030734
 protein coding gene Chr6:96294406-96296102 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031433
 protein coding gene Chr6:91531355-91533051 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0030085
 protein coding gene Chr6:88261153-88262848 (+)
CBA/J MGP_CBAJ_G0030660
 protein coding gene Chr6:95078602-95080298 (+)
DBA/2J MGP_DBA2J_G0030816
 protein coding gene Chr6:84999885-85001581 (+)
FVB/NJ MGP_FVBNJ_G0030769
 protein coding gene Chr6:84188711-84190407 (+)
LP/J MGP_LPJ_G0030893
 protein coding gene Chr6:89159599-89161295 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030802
 protein coding gene Chr6:99207365-99209061 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031460
 protein coding gene Chr6:88034410-88036106 (+)
PWK/PhJ MGP_PWKPhJ_G0029800
 protein coding gene Chr6:83970161-83971851 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029628
 protein coding gene Chr6:86847777-86849464 (+)
WSB/EiJ MGP_WSBEiJ_G0030166
 protein coding gene Chr6:88483051-88484747 (+)



Homology
more
  • Human Ortholog
    GP9, glycoprotein IX platelet
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GP9, glycoprotein IX platelet
  • Synonyms
    CD42a, GPIX
  • Links
    NCBI Gene ID: 2815
    neXtProt AC: NX_P14770
    UniProt: P14770

  • Chr Location
    3q21.3; chr3:129054845-129062406 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human GP9 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    5
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    763
  • Tissues
    14
  • cDNA Data
    5
  • Literature Summary
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030054 Ensembl Gene Model | MGI Sequence Detail 1697 C57BL/6J ±  kb
transcript ENSMUST00000032133 Ensembl | MGI Sequence Detail 881 Not Applicable  
polypeptide ENSMUSP00000032133 Ensembl | MGI Sequence Detail 177 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 5
    Primer pair 2

    Microarray probesets 3
References
more
  • Summaries
    All 45
    Developmental Gene Expression 4
    Gene Ontology 5
    Phenotypes 11
  • Earliest
    J:51437 Kitaguchi T, et al., Characterization of cDNA encoding full-length mouse platelet glycoprotein IX. Blood Coagul Fibrinolysis. 1998 Jun;9(4):381-5
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory