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Zfp316 Gene Detail
Summary
  • Symbol
    Zfp316
  • Name
    zinc finger protein 316
  • Synonyms
    Emzf1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1860402
    NCBI Gene: 54201
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:143235452-143255777 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 82.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    681 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1860402
 protein coding gene Chr5:143235450-143258269 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030326
 protein coding gene Chr5:148571263-148591577 (-)
A/J MGP_AJ_G0030295
 protein coding gene Chr5:142193457-142214388 (-)
AKR/J MGP_AKRJ_G0030227
 protein coding gene Chr5:146653293-146673545 (-)
BALB/cJ MGP_BALBcJ_G0030312
 protein coding gene Chr5:143445819-143466321 (-)
C3H/HeJ MGP_C3HHeJ_G0030023
 protein coding gene Chr5:147463581-147485488 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030757
 protein coding gene Chr5:154001924-154022217 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027975
 protein coding gene Chr5:135973375-135993913 (-)
CAST/EiJ MGP_CASTEiJ_G0029428
 protein coding gene Chr5:146953887-146977246 (-)
CBA/J MGP_CBAJ_G0029993
 protein coding gene Chr5:160348250-160372227 (-)
DBA/2J MGP_DBA2J_G0030143
 protein coding gene Chr5:141960561-141981875 (-)
FVB/NJ MGP_FVBNJ_G0030098
 protein coding gene Chr5:141169266-141191018 (-)
LP/J MGP_LPJ_G0030229
 protein coding gene Chr5:149172680-149195646 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030129
 protein coding gene Chr5:162751244-162773065 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030797
 protein coding gene Chr5:146496786-146518096 (-)
PWK/PhJ MGP_PWKPhJ_G0029143
 protein coding gene Chr5:141045893-141066717 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028979
 protein coding gene Chr5:144233511-144254166 (-)
WSB/EiJ MGP_WSBEiJ_G0029501
 protein coding gene Chr5:147289800-147310088 (-)



Homology
more
  • Human Ortholog
    ZNF316, zinc finger protein 316
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    730
  • Tissues
    15
  • cDNA Data
    36
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046658 Ensembl Gene Model | MGI Sequence Detail 20326 C57BL/6J ±  kb
transcript ENSMUST00000161448 Ensembl | MGI Sequence Detail 6891 Not Applicable  
polypeptide ENSMUSP00000125416 Ensembl | MGI Sequence Detail 1017 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 36
    cDNA 36

    Microarray probesets 5
References
more
  • Summaries
    All 27
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory