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Repin1 Gene Detail
Summary
  • Symbol
    Repin1
  • Name
    replication initiator 1
  • Synonyms
    AP4, E430037F08Rik, Zfp464
  • Feature Type
    protein coding gene
  • IDs
    MGI:1889817
    NCBI Gene: 58887
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:48570817-48576016 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 23.57 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    205 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1889817
 protein coding gene Chr6:48570817-48576016 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030700
 protein coding gene Chr6:47545672-47550871 (+)
A/J MGP_AJ_G0030671
 protein coding gene Chr6:45384258-45389429 (+)
AKR/J MGP_AKRJ_G0030596
 protein coding gene Chr6:46978849-46984027 (+)
BALB/cJ MGP_BALBcJ_G0030681
 protein coding gene Chr6:45714732-45719942 (+)
C3H/HeJ MGP_C3HHeJ_G0030394
 protein coding gene Chr6:46985189-46990396 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031136
 protein coding gene Chr6:48662333-48667514 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028343
 protein coding gene Chr6:43013886-43019095 (+)
CAST/EiJ MGP_CASTEiJ_G0029798
 protein coding gene Chr6:46711492-46716677 (+)
CBA/J MGP_CBAJ_G0030369
 protein coding gene Chr6:50680911-50689386 (+)
DBA/2J MGP_DBA2J_G0030518
 protein coding gene Chr6:45300765-45306291 (+)
FVB/NJ MGP_FVBNJ_G0030470
 protein coding gene Chr6:44930075-44935271 (+)
LP/J MGP_LPJ_G0030603
 protein coding gene Chr6:47526779-47531985 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030504
 protein coding gene Chr6:53493505-53498686 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031165
 protein coding gene Chr6:46847919-46853116 (+)
PWK/PhJ MGP_PWKPhJ_G0029510
 protein coding gene Chr6:44834605-44839799 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029346
 protein coding gene Chr6:46198764-46203969 (+)
WSB/EiJ MGP_WSBEiJ_G0029875
 protein coding gene Chr6:46846928-46852141 (+)



Homology
more
  • Human Ortholog
    REPIN1, replication initiator 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    REPIN1, replication initiator 1
  • Synonyms
    AP4, RIP60, Zfp464, ZNF464
  • Links
    NCBI Gene ID: 29803
    neXtProt AC: NX_Q9BWE0
    UniProt: Q9BWE0

  • Chr Location
    7q36.1; chr7:150368096-150374044 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from multigenic genotypes
    8 phenotype references
Mice homozygous for a knock-out allele improves in insulin sensitivity and glucose metabolism in Leprdb homozygotes.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    763
  • Tissues
    45
  • cDNA Data
    12
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 58887 NCBI Gene Model | MGI Sequence Detail 5200 C57BL/6J ±  kb
transcript NM_001079901 RefSeq | MGI Sequence Detail 3177 C57BL/6  
polypeptide Q5U4E2 UniProt | EBI | MGI Sequence Detail 545 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 7
References
more
  • Summaries
    All 38
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 8
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory