Ear-ps2 Pseudogene Detail

Summary

• Symbol
  Ear-ps2
• Name
  eosinophil-associated, ribonuclease A family, pseudogene 2

• Feature Type
  pseudogene
• IDs
  MGI:1890466
  NCBI Gene: 93743
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:44284442-44284907 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 22.52 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  173 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1890466	pseudogene	Chr14:44284438-44285092 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040081	pseudogene	Chr14:45863385-45863847 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0040002	pseudogene	Chr14:45433910-46289890 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0039712	pseudogene	Chr14:46092815-46093277 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0039676	pseudogene	Chr14:49334802-49335264 (+)
DBA/2J	MGP_DBA2J_G0039865	pseudogene	Chr14:36348181-36348646 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0039915	pseudogene	Chr14:45515538-45516003 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0038205	pseudogene	Chr14:41132940-41147537 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Ear-ps2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Ear-ps2
• Find Mice (IMSR)
  14 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  1

• Ensembl
  ENSMUSG00000072599 (Evidence)
• NCBI Gene
  93743

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000072599	Ensembl Gene Model | MGI Sequence Detail	466	C57BL/6J
transcript	ENSMUST00000100689	Ensembl | MGI Sequence Detail	466	Not Applicable

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:69087 Cormier SA, et al., Mouse eosinophil-associated ribonucleases: a unique subfamily expressed during hematopoiesis. Mamm Genome. 2001 May;12(5):352-61
• Latest
  J:95949 Cho S, et al., The ribonuclease A superfamily of mammals and birds: identifying new members and tracing evolutionary histories. Genomics. 2005 Feb;85(2):208-20