About   Help   FAQ
Cbx3-ps1 Pseudogene Detail
Summary
  • Symbol
    Cbx3-ps1
  • Name
    chromobox 3, pseudogene 1
  • Synonyms
    Gm6917
Location &
Maps
more
  • Sequence Map
    Chr13:66042029-66042573 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 34.50 cM, cytoband B
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1890538
 pseudogene Chr13:66041878-66042634 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0014530
 pseudogene Chr9:4755063-4757738 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    8
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074841 Ensembl Gene Model | MGI Sequence Detail 545 C57BL/6J ±  kb
transcript ENSMUST00000091539 Ensembl | MGI Sequence Detail 545 Not Applicable  
polypeptide XP_036014153 RefSeq | MGI Sequence Detail 173 C57BL/6J  
For the selected sequence
Other
Accession IDs
less
MGI:3646077
References
more
  • Summaries
    All 9
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:75485 Jones DO, et al., The gene and pseudogenes of Cbx3/mHP1 gamma. DNA Seq. 2001;12(3):147-60
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory