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Snurf Gene Detail
Summary
  • Symbol
    Snurf
  • Name
    SNRPN upstream reading frame
  • Synonyms
    MGC:18604, MGC:30325
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891236
    NCBI Gene: 84704
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:59645197-59654797 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 34.04 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    334 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1891236
 protein coding gene Chr7:59632243-59654947 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032325
 protein coding gene Chr7:60794046-60803209 (-)
A/J MGP_AJ_G0032304
 protein coding gene Chr7:59707327-59717634 (-)
AKR/J MGP_AKRJ_G0032240
 protein coding gene Chr7:61015700-61025886 (-)
BALB/cJ MGP_BALBcJ_G0032316
 protein coding gene Chr7:59312421-59321650 (-)
C3H/HeJ MGP_C3HHeJ_G0032029
 protein coding gene Chr7:61335411-61348862 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032809
 protein coding gene Chr7:63441585-63451748 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029816
 protein coding gene Chr7:62141971-62150874 (-)
CAST/EiJ MGP_CASTEiJ_G0031358
 protein coding gene Chr7:52313470-52323649 (-)
CBA/J MGP_CBAJ_G0031994
 protein coding gene Chr7:65529496-65540428 (-)
DBA/2J MGP_DBA2J_G0032151
 protein coding gene Chr7:58637012-58647456 (-)
FVB/NJ MGP_FVBNJ_G0032105
 protein coding gene Chr7:58614369-58624005 (-)
LP/J MGP_LPJ_G0032232
 protein coding gene Chr7:61940768-61950753 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032142
 protein coding gene Chr7:65286510-65296145 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032826
 protein coding gene Chr7:60307324-60316926 (-)
PWK/PhJ MGP_PWKPhJ_G0031078
 protein coding gene Chr7:51612361-51625298 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030919
 protein coding gene Chr7:47774153-47783247 (-)
WSB/EiJ MGP_WSBEiJ_G0031476
 protein coding gene Chr7:60632235-60642211 (-)



Homology
more
  • Human Ortholog
    SNURF, SNRPN upstream open reading frame
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNURF, SNRPN upstream open reading frame
  • Links
    NCBI Gene ID: 8926
    neXtProt AC: NX_P63162, NX_Q9Y675
    UniProt: Q9Y675

  • Chr Location
    15q11.2; chr15:24954987-24978723 (+)  GRCh38
Human Diseases
less
  • References
    4 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    32 phenotype references
  • All Mutations and Alleles
    4
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Targeted
    1
  • Transgenic
    1
  • Genomic Mutations
    3 involving Snurf
  • Find Mice (IMSR)
    4 strains or lines available
This marker is part of a bicistronic gene with Snrpn. All alleles are listed on the Snrpn detail page.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    1070
  • Tissues
    37
  • cDNA Data
    8
  • Literature Summary
    3
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102627 Ensembl Gene Model | MGI Sequence Detail 9601 C57BL/6J ±  kb
transcript ENSMUST00000194059 Ensembl | MGI Sequence Detail 216 Not Applicable  
polypeptide ENSMUSP00000141531 Ensembl | MGI Sequence Detail 71 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
References
more
  • Summaries
    All 60
    Developmental Gene Expression 3
    Diseases 4
    Gene Ontology 5
    Phenotypes 32
  • Earliest
    J:56614 Gabriel JM, et al., A transgene insertion creating a heritable chromosome deletion mouse model of Prader-Willi and angelman syndromes. Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):9258-63
  • Latest
    J:335224 Nakai N, et al., Virtual reality-based real-time imaging reveals abnormal cortical dynamics during behavioral transitions in a mouse model of autism. Cell Rep. 2023 Mar 24;:112258
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory