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Psg20 Gene Detail
Summary
  • Symbol
    Psg20
  • Name
    pregnancy-specific beta-1-glycoprotein 20
  • Synonyms
    cea7, EG434540
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891352
    NCBI Gene: 434540
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:18408032-18420110 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 9.23 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    456 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1891352
 protein coding gene Chr7:18407910-18420218 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031741
 protein coding gene Chr7:16595447-16600652 (-)
A/J MGP_AJ_G0031717
 protein coding gene Chr7:16232956-16434820 (-)
AKR/J MGP_AKRJ_G0031643
 protein coding gene Chr7:16721910-16731456 (-)
BALB/cJ MGP_BALBcJ_G0031725
 protein coding gene Chr7:16602840-16623778 (-)
C3H/HeJ MGP_C3HHeJ_G0031443
 protein coding gene Chr7:16779996-17116512 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032188
 protein coding gene Chr7:17439132-17458937 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0031403
 protein coding gene Chr7:17835061-17909141 (-)
DBA/2J MGP_DBA2J_G0031562
 protein coding gene Chr7:16072985-16083247 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0031645
 protein coding gene Chr7:16938975-16944822 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031547
 protein coding gene Chr7:17770063-17782859 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    CEACAM4, CEA cell adhesion molecule 4
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CEACAM4, CEA cell adhesion molecule 4
  • Synonyms
    CGM7, CGM7_HUMAN, NCA
  • Links
    NCBI Gene ID: 1089
    neXtProt AC: NX_O75871
    UniProt: O75871

  • Chr Location
    19q13.2; chr19:41613436-41627074 (-)  GRCh38
  • Human Ortholog
    CEACAM7, CEA cell adhesion molecule 7
  • Synonyms
    CGM2
  • Links
    NCBI Gene ID: 1087
    neXtProt AC: NX_Q14002
    UniProt: Q14002

  • Chr Location
    19q13.2; chr19:41673303-41706976 (-)  GRCh38
  • Human Ortholog
    CEACAM8, CEA cell adhesion molecule 8
  • Synonyms
    CD66b, CD67, CGM6, NCA-95
  • Links
    NCBI Gene ID: 1088
    neXtProt AC: NX_P31997
    UniProt: P31997

  • Chr Location
    19q13.2; chr19:42580243-42595055 (-)  GRCh38
  • Human Ortholog
    PSG5, pregnancy specific beta-1-glycoprotein 5
  • Synonyms
    FL-NCA-3, PSG
  • Links
    NCBI Gene ID: 5673
    neXtProt AC: NX_Q15238
    UniProt: Q15238

  • Chr Location
    19q13.31; chr19:43166256-43186536 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      21
    • RefSeq
      4
    • UniProt
      1
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000063305 Ensembl Gene Model | MGI Sequence Detail 12079 C57BL/6J ±  kb
    transcript ENSMUST00000108482 Ensembl | MGI Sequence Detail 1871 Not Applicable  
    polypeptide ENSMUSP00000104122 Ensembl | MGI Sequence Detail 472 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less

    • Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:3648784
    References
    more
    • Summaries
      All 14
      Gene Ontology 1
      Phenotypes 4
    • Earliest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory