Ccl19-ps2 Pseudogene Detail

Summary

• Symbol
  Ccl19-ps2
• Name
  C-C motif chemokine ligand 19, pseudogene 2
• Synonyms
  ELC, Scya19-ps2

• Feature Type
  pseudogene
• IDs
  MGI:1891390
  NCBI Gene: 65958
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:42568087-42651068 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 22.67 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  1 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1891390	pseudogene	Chr4:42568087-42651068 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Ccl19-ps2
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  7
• RefSeq
  4

• NCBI Gene
  65958

Representative Sequences			Length	Strain/Species
genomic	65958	NCBI Gene Model | MGI Sequence Detail	82982	C57BL/6J
transcript	NR_169016	RefSeq | MGI Sequence Detail	1351	ZRU/MplStud

Molecular
Reagents

• All nucleic 3

  Genomic 3

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:66381 Nakano H, et al., Gene duplications at the chemokine locus on mouse chromosome 4: multiple strain-specific haplotypes and the deletion of secondary lymphoid-organ chemokine and EBI-1 ligand chemokine genes in the plt mutation. J Immunol. 2001 Jan 1;166(1):361-9
• Latest
  J:76755 IUIS/WHO Subcommittee on Chemokine Nomenclature, Chemokine/chemokine receptor nomenclature. J Immunol Methods. 2002 Apr 1;262(1-2):1-3