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Rmdn1 Gene Detail
Summary
  • Symbol
    Rmdn1
  • Name
    regulator of microtubule dynamics 1
  • Synonyms
    2410005O16Rik, 5033415E11Rik, 5730501K14Rik, 6430576D04Rik, Fam82b
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913552
    NCBI Gene: 66302
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:19575162-19606932 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 7.56 cM, cytoband A3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1163 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913552
 protein coding gene Chr4:19575036-19606932 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028081
 protein coding gene Chr4:16601942-16640248 (+)
A/J MGP_AJ_G0028039
 protein coding gene Chr4:16136543-16168556 (+)
AKR/J MGP_AKRJ_G0028004
 protein coding gene Chr4:16489034-16520784 (+)
BALB/cJ MGP_BALBcJ_G0028050
 protein coding gene Chr4:16109215-16141059 (+)
C3H/HeJ MGP_C3HHeJ_G0027780
 protein coding gene Chr4:16594735-16626844 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028493
 protein coding gene Chr4:17264008-17297397 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025835
 protein coding gene Chr4:14931178-14963102 (+)
CAST/EiJ MGP_CASTEiJ_G0027235
 protein coding gene Chr4:16407222-16440650 (+)
CBA/J MGP_CBAJ_G0027753
 protein coding gene Chr4:17762202-17797657 (+)
DBA/2J MGP_DBA2J_G0027896
 protein coding gene Chr4:15944829-15977902 (+)
FVB/NJ MGP_FVBNJ_G0027862
 protein coding gene Chr4:15669446-15701789 (+)
LP/J MGP_LPJ_G0028005
 protein coding gene Chr4:16636160-16668463 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027895
 protein coding gene Chr4:18792673-18836896 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028552
 protein coding gene Chr4:16377242-16413694 (+)
PWK/PhJ MGP_PWKPhJ_G0026955
 protein coding gene Chr4:15843727-15875877 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026784
 protein coding gene Chr4:16253825-16286678 (+)
WSB/EiJ MGP_WSBEiJ_G0027312
 protein coding gene Chr4:16438135-16470718 (+)



Homology
more
  • Human Ortholog
    RMDN1, regulator of microtubule dynamics 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RMDN1, regulator of microtubule dynamics 1
  • Synonyms
    CGI-90, FAM82B, RMD-1, RMD1
  • Links
    NCBI Gene ID: 51115
    neXtProt AC: NX_Q96DB5
    UniProt: Q96DB5

  • Chr Location
    8q21.3; chr8:86468257-86514357 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    16
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028229 Ensembl Gene Model | MGI Sequence Detail 31771 C57BL/6J ±  kb
transcript ENSMUST00000029888 Ensembl | MGI Sequence Detail 1734 Not Applicable  
polypeptide ENSMUSP00000029888 Ensembl | MGI Sequence Detail 305 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000029724 regulator of microtubule dynamics protein 1
    (term hierarchy)
  • InterPro Domains
    IPR049039 Regulator of microtubule dynamics protein 1-3, alpha helical repeats
    IPR011990 Tetratricopeptide-like helical domain superfamily
  • GlyGen
    Q9DCV4 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 7
Other
Accession IDs
less
MGI:1923210, MGI:1925339, MGI:2140285, MGI:2443843
References
more
  • Summaries
    All 29
    Gene Ontology 4
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory