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Dnajc5b Gene Detail
Summary
  • Symbol
    Dnajc5b
  • Name
    DnaJ heat shock protein family (Hsp40) member C5 beta
  • Synonyms
    1700008A05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913576
    NCBI Gene: 66326
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:19562759-19665026 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 5.55 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3413 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913576
 protein coding gene Chr3:19562755-19665026 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027093
 protein coding gene Chr3:16716004-16815445 (+)
A/J MGP_AJ_G0027053
 protein coding gene Chr3:16637263-16731971 (+)
AKR/J MGP_AKRJ_G0027022
 protein coding gene Chr3:16787961-16887854 (+)
BALB/cJ MGP_BALBcJ_G0027065
 protein coding gene Chr3:16395407-16493641 (+)
C3H/HeJ MGP_C3HHeJ_G0026806
 protein coding gene Chr3:16822285-16920778 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027510
 protein coding gene Chr3:17800405-17897259 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024871
 protein coding gene Chr3:14713899-14813316 (+)
CAST/EiJ MGP_CASTEiJ_G0026261
 protein coding gene Chr3:16717743-16837954 (+)
CBA/J MGP_CBAJ_G0026784
 protein coding gene Chr3:18159315-18265803 (+)
DBA/2J MGP_DBA2J_G0026918
 protein coding gene Chr3:16238853-16344093 (+)
FVB/NJ MGP_FVBNJ_G0026886
 protein coding gene Chr3:15899184-16002750 (+)
LP/J MGP_LPJ_G0027030
 protein coding gene Chr3:17354355-17456517 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026907
 protein coding gene Chr3:20235697-20343037 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027569
 protein coding gene Chr3:16553805-16653667 (+)
PWK/PhJ MGP_PWKPhJ_G0025994
 protein coding gene Chr3:15959964-16059673 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025802
 protein coding gene Chr3:16400625-16507106 (+)
WSB/EiJ MGP_WSBEiJ_G0026335
 protein coding gene Chr3:16592658-16696909 (+)



Homology
more
  • Human Ortholog
    DNAJC5B, DnaJ heat shock protein family (Hsp40) member C5 beta
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DNAJC5B, DnaJ heat shock protein family (Hsp40) member C5 beta
  • Synonyms
    CSP-beta
  • Links
    NCBI Gene ID: 85479
    neXtProt AC: NX_Q9UF47
    UniProt: Q9UF47

  • Chr Location
    8q13.1; chr8:66014978-66101245 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    8
  • Endonuclease-mediated
    3
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    1 involving Dnajc5b
  • Find Mice (IMSR)
    21 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    1
  • cDNA Data
    16
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000027606 Ensembl Gene Model | MGI Sequence Detail 102268 C57BL/6J ±  kb
transcript ENSMUST00000165693 Ensembl | MGI Sequence Detail 955 Not Applicable  
polypeptide ENSMUSP00000127515 Ensembl | MGI Sequence Detail 199 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 16
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 1
    Phenotypes 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory