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1700029M20Rik Gene Detail
Summary
  • Symbol
    1700029M20Rik
  • Name
    RIKEN cDNA 1700029M20 gene
  • Synonyms
    4930406E24Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1913597
    NCBI Gene: 73937
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:135353966-135357509 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 67.87 cM, cytoband D3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    224 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913597
 lncRNA gene Chr4:135353966-135357509 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006535
 lincRNA gene Chr4:138075567-138079110 (+)
A/J MGP_AJ_G0006527
 lincRNA gene Chr4:132241134-132244677 (+)
AKR/J MGP_AKRJ_G0006501
 lincRNA gene Chr4:136051616-136055159 (+)
BALB/cJ MGP_BALBcJ_G0006501
 lincRNA gene Chr4:132900181-132903724 (+)
C3H/HeJ MGP_C3HHeJ_G0006451
 lincRNA gene Chr4:136328283-136331826 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006667
 lincRNA gene Chr4:143005242-143008785 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005944
 lincRNA gene Chr4:125295584-125299118 (+)
CAST/EiJ MGP_CASTEiJ_G0006383
 lincRNA gene Chr4:134457305-134460841 (+)
CBA/J MGP_CBAJ_G0006434
 lincRNA gene Chr4:146907364-146910907 (+)
DBA/2J MGP_DBA2J_G0006456
 lincRNA gene Chr4:132656908-132660451 (+)
FVB/NJ MGP_FVBNJ_G0006478
 lincRNA gene Chr4:131577541-131581084 (+)
LP/J MGP_LPJ_G0006536
 lincRNA gene Chr4:138173674-138177217 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006465
 lincRNA gene Chr4:151219854-151223397 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006671
 lincRNA gene Chr4:136497337-136500875 (+)
PWK/PhJ MGP_PWKPhJ_G0006320
 lincRNA gene Chr4:129431200-129434743 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006229
 lincRNA gene Chr4:132319395-132322955 (+)
WSB/EiJ MGP_WSBEiJ_G0006428
 lincRNA gene Chr4:136674136-136677679 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    2
  • Gene trapped
    5
  • Targeted
    1
  • Genomic Mutations
    3 involving 1700029M20Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    13
Sequences &
Gene Models
less
  • All Sequences
    55
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 73937 NCBI Gene Model | MGI Sequence Detail 3544 C57BL/6J ±  kb
transcript NR_015613 RefSeq | MGI Sequence Detail 2963 C57BL/6  
polypeptide Q9D5N3 UniProt | EBI | MGI Sequence Detail 113 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 5
Other
Accession IDs
less
MGI:1921187
References
more
  • Summaries
    All 21
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory