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Pigbos1 Gene Detail
Summary
  • Symbol
    Pigbos1
  • Name
    Pigb opposite strand 1
  • Synonyms
    2310009A05Rik, 5031420N21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913614
    NCBI Gene: 66364
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:72947000-72950061 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 40.08 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    251 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913614
 protein coding gene Chr9:72947000-72950064 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015744
 unclassified non-coding RNA gene Chr9:73248699-73251747 (+)
A/J MGP_AJ_G0015721
 unclassified non-coding RNA gene Chr9:70684785-70687840 (+)
AKR/J MGP_AKRJ_G0015685
 unclassified non-coding RNA gene Chr9:72378659-72383119 (+)
BALB/cJ MGP_BALBcJ_G0015682
 unclassified non-coding RNA gene Chr9:70391782-70394850 (+)
C3H/HeJ MGP_C3HHeJ_G0015504
 unclassified non-coding RNA gene Chr9:72871804-72874857 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016138
 unclassified non-coding RNA gene Chr9:75171927-75174977 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013864
 unclassified non-coding RNA gene Chr9:70153778-70156851 (+)
CAST/EiJ MGP_CASTEiJ_G0015059
 unclassified non-coding RNA gene Chr9:73213142-73217125 (+)
CBA/J MGP_CBAJ_G0015484
 unclassified non-coding RNA gene Chr9:77782858-77785912 (+)
DBA/2J MGP_DBA2J_G0015582
 unclassified non-coding RNA gene Chr9:70401659-70404702 (+)
FVB/NJ MGP_FVBNJ_G0015587
 unclassified non-coding RNA gene Chr9:69711389-69714452 (+)
LP/J MGP_LPJ_G0015662
 unclassified non-coding RNA gene Chr9:73467210-73470258 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015610
 unclassified non-coding RNA gene Chr9:78867822-78870872 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016180
 unclassified non-coding RNA gene Chr9:72532392-72535455 (+)
PWK/PhJ MGP_PWKPhJ_G0014840
 unclassified non-coding RNA gene Chr9:70679123-70682328 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014628
 unclassified non-coding RNA gene Chr9:72819083-72822186 (+)
WSB/EiJ MGP_WSBEiJ_G0015163
 unclassified non-coding RNA gene Chr9:72467721-72470784 (+)



Homology
more
  • Human Ortholog
    PIGBOS1, PIGB opposite strand 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    39
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    37
  • Genomic Mutations
    1 involving Pigbos1
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    13
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000098332 Ensembl Gene Model | MGI Sequence Detail 3062 C57BL/6J ±  kb
transcript ENSMUST00000184126 Ensembl | MGI Sequence Detail 496 Not Applicable  
polypeptide ENSMUSP00000159173 Ensembl | MGI Sequence Detail 57 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 2
Other
Accession IDs
less
MGI:1926065, MGI:6360590
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory