Krtap3-3 MGI Mouse Gene Detail - MGI:1913630 - keratin associated protein 3-3

Symbol

Krtap3-3
Name

keratin associated protein 3-3
Synonyms

2310020D06Rik, KAP3.3, KRTAP3.3

Feature Type

protein coding gene
IDs

MGI:1913630
NCBI Gene: 66380
Alliance

gene page
Transcription Start Sites

1 TSS

Sequence Map

Chr11:99440958-99441689 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 11, 62.92 cM
Mapping Data

1 experiment

SNPs within 2kb

147 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1913630	protein coding gene	Chr11:99440956-99441691 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0019097	protein coding gene	Chr11:102223292-102225229 (-)
A/J	MGP_AJ_G0019065	protein coding gene	Chr11:97920097-97920828 (-)
AKR/J	MGP_AKRJ_G0019035	protein coding gene	Chr11:100960827-100961558 (-)
BALB/cJ	MGP_BALBcJ_G0019039	protein coding gene	Chr11:98431891-98432626 (-)
C3H/HeJ	MGP_C3HHeJ_G0018852	protein coding gene	Chr11:101108528-101109259 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0019489	protein coding gene	Chr11:105356076-105356811 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0017122	protein coding gene	Chr11:95479169-95479900 (-)
CAST/EiJ	MGP_CASTEiJ_G0018407	protein coding gene	Chr11:102109009-102112230 (-)
CBA/J	MGP_CBAJ_G0018823	protein coding gene	Chr11:109751341-109752076 (-)
DBA/2J	MGP_DBA2J_G0018931	protein coding gene	Chr11:97488052-97488794 (-)
FVB/NJ	MGP_FVBNJ_G0018920	protein coding gene	Chr11:96995411-96996142 (-)
LP/J	MGP_LPJ_G0019001	protein coding gene	Chr11:102690633-102691364 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0018947	protein coding gene	Chr11:109419550-109420281 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0019530	protein coding gene	Chr11:101325168-101325899 (-)
PWK/PhJ	MGP_PWKPhJ_G0018178	protein coding gene	Chr11:98561990-98562725 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0017966	protein coding gene	Chr11:101065852-101068071 (-)
WSB/EiJ	MGP_WSBEiJ_G0018455	protein coding gene	Chr11:101289951-101290682 (-)

Human Ortholog

KRTAP3-2, keratin associated protein 3-2

Vertebrate Orthologs

4

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

KRTAP3-2, keratin associated protein 3-2
Synonyms

KAP3.2, KRTAP3.2
Links

HGNC:16779

NCBI Gene ID: 83897

neXtProt AC: NX_Q9BYR7

UniProt: Q9BYR7
Chr Location

17q21.2; chr17:40999193-40999906 (-) GRCh38

Human Ortholog

KRTAP3-3, keratin associated protein 3-3
Synonyms

KAP3.3, KRTAP3.3
Links

HGNC:18890

NCBI Gene ID: 85293

neXtProt AC: NX_Q9BYR6

UniProt: Q9BYR6
Chr Location

17q21.2; chr17:40993430-40994164 (-) GRCh38

MGI Vertebrate Homology

Krtap3-3 stringent orthology
2 human;1 mouse;2 rat
HCOP

vertebrate homology predictions: KRTAP3-2, KRTAP3-3
Gene Tree

Krtap3-3

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Phenotype Summary

7 phenotype references

All Mutations and Alleles

3
Endonuclease-mediated

1
Targeted

2
Genomic Mutations

2 involving Krtap3-3
Incidental Mutations

CvDC
Find Mice (IMSR)

3 strains or lines available

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All GO Annotations

3
GO References

2

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

749
Tissues

29
cDNA Data

23
Literature Summary

1

Images

Tissue x Stage Matrix

Other Mouse Links

GEO

Expression Atlas

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All Sequences

31
RefSeq

2
UniProt

1
CCDS

CCDS25385.1

Ensembl

ENSMUSG00000069722 (Evidence)
NCBI Gene

66380

			Length	Strain/Species	Flank
genomic	66380	NCBI Gene Model \| MGI Sequence Detail	732	C57BL/6J	± kb
transcript	NM_025524	RefSeq \| MGI Sequence Detail	732	C57BL/6
polypeptide	Q9D7P0	UniProt \| EBI \| MGI Sequence Detail	99	Not Applicable

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UniProt

1 Sequence

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All nucleic 23

cDNA 23

Microarray probesets 3

Summaries

All 27

Developmental Gene Expression 1

Gene Ontology 2

Phenotypes 7
Earliest

J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
Latest

J:230728 Kumar V, et al., A keratin scaffold regulates epidermal barrier formation, mitochondrial lipid composition, and activity. J Cell Biol. 2015 Dec 7;211(5):1057-75

TSS for Krtap3-3:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr110679	Chr11:99441687-99441693 (-)	-1 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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