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Rnf113a2 Gene Detail
Summary
  • Symbol
    Rnf113a2
  • Name
    ring finger protein 113A2
  • Synonyms
    2310020H19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913631
    NCBI Gene: 66381
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:84463974-84465352 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 39.20 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    111 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913631
 protein coding gene Chr12:84463970-84465352 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019937
 protein coding gene Chr12:85123109-85124491 (+)
A/J MGP_AJ_G0019894
 protein coding gene Chr12:81901313-81902695 (+)
AKR/J MGP_AKRJ_G0019870
 protein coding gene Chr12:84118348-84119730 (+)
BALB/cJ MGP_BALBcJ_G0019874
 protein coding gene Chr12:82234274-82235656 (+)
C3H/HeJ MGP_C3HHeJ_G0019680
 protein coding gene Chr12:84584429-84585811 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020325
 protein coding gene Chr12:87578690-87580072 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017943
 protein coding gene Chr12:78802242-78803625 (+)
CAST/EiJ MGP_CASTEiJ_G0019229
 protein coding gene Chr12:79538945-79540327 (+)
CBA/J MGP_CBAJ_G0019651
 protein coding gene Chr12:90960439-90961821 (+)
DBA/2J MGP_DBA2J_G0019766
 protein coding gene Chr12:81429988-81431370 (+)
FVB/NJ MGP_FVBNJ_G0019752
 protein coding gene Chr12:80386760-80388142 (+)
LP/J MGP_LPJ_G0019838
 protein coding gene Chr12:85006385-85007767 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019791
 protein coding gene Chr12:93867621-93869003 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020359
 protein coding gene Chr12:83712190-83713572 (+)
PWK/PhJ MGP_PWKPhJ_G0018993
 protein coding gene Chr12:75919412-75920794 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018788
 protein coding gene Chr12:78206920-78208302 (+)
WSB/EiJ MGP_WSBEiJ_G0019281
 protein coding gene Chr12:84429107-84430489 (+)



Homology
more
  • Human Ortholog
    RNF113A, ring finger protein 113A
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RNF113A, ring finger protein 113A
  • Synonyms
    Cwc24, RNF113, TTD5, ZNF183
  • Links
    NCBI Gene ID: 7737
    neXtProt AC: NX_O15541
    UniProt: O15541

  • Chr Location
    Xq24; chrX:119870475-119871733 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human RNF113A associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    29
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66381 NCBI Gene Model | MGI Sequence Detail 1379 C57BL/6J ±  kb
transcript NM_025525 RefSeq | MGI Sequence Detail 1393 C57BL/6  
polypeptide NP_079801 RefSeq | MGI Sequence Detail 337 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR039971 Pre-mRNA-splicing factor CWC24-like
    IPR000571 Zinc finger, CCCH-type
    IPR036855 Zinc finger, CCCH-type superfamily
    IPR013083 Zinc finger, RING/FYVE/PHD-type
    IPR001841 Zinc finger, RING-type
    IPR017907 Zinc finger, RING-type, conserved site
  • GlyGen
    Q14B01 1 site, 1 N-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 29
    cDNA 29

    Microarray probesets 4
Other
Accession IDs
less
MGI:2144811
References
more
  • Summaries
    All 23
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory