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Rsl1d1 Gene Detail
Summary
  • Symbol
    Rsl1d1
  • Name
    ribosomal L1 domain containing 1
  • Synonyms
    2410005K20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913659
    NCBI Gene: 66409
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:11010901-11021156 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 6.37 cM, cytoband B1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    364 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913659
 protein coding gene Chr16:11010834-11021195 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022522
 protein coding gene Chr16:8055474-8067863 (-)
A/J MGP_AJ_G0022484
 protein coding gene Chr16:7608051-7618374 (-)
AKR/J MGP_AKRJ_G0022460
 protein coding gene Chr16:7959567-7969833 (-)
BALB/cJ MGP_BALBcJ_G0022488
 protein coding gene Chr16:7752041-7762316 (-)
C3H/HeJ MGP_C3HHeJ_G0022255
 protein coding gene Chr16:8035148-8045493 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022937
 protein coding gene Chr16:8215738-8227072 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020457
 protein coding gene Chr16:7780598-7787377 (-)
CAST/EiJ MGP_CASTEiJ_G0021782
 protein coding gene Chr16:8059548-8069943 (-)
CBA/J MGP_CBAJ_G0022224
 protein coding gene Chr16:8565784-8577627 (-)
DBA/2J MGP_DBA2J_G0022355
 protein coding gene Chr16:7612792-7623169 (-)
FVB/NJ MGP_FVBNJ_G0022331
 protein coding gene Chr16:7605226-7615446 (-)
LP/J MGP_LPJ_G0022423
 protein coding gene Chr16:8004824-8016349 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022353
 protein coding gene Chr16:8262957-8273149 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022950
 protein coding gene Chr16:7903200-7915364 (-)
PWK/PhJ MGP_PWKPhJ_G0021522
 protein coding gene Chr16:7842094-7852793 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021352
 protein coding gene Chr16:7972190-7982573 (-)
WSB/EiJ MGP_WSBEiJ_G0021830
 protein coding gene Chr16:7992910-8003157 (-)



Homology
more
  • Human Ortholog
    RSL1D1, ribosomal L1 domain containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RSL1D1, ribosomal L1 domain containing 1
  • Synonyms
    CSIG, L12, PBK1, UTP30
  • Links
    NCBI Gene ID: 26156
    neXtProt AC: NX_O76021
    UniProt: O76021

  • Chr Location
    16p13.13; chr16:11833850-11851580 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    720
  • Tissues
    14
  • cDNA Data
    238
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 66409 NCBI Gene Model | MGI Sequence Detail 10256 C57BL/6J ±  kb
transcript NM_025546 RefSeq | MGI Sequence Detail 1839 C57BL/6  
polypeptide Q8BVY0 UniProt | EBI | MGI Sequence Detail 452 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    12 Sequences
  • Protein Ontology
    PR:000029723 ribosomal L1 domain-containing protein 1
    (term hierarchy)
  • InterPro Domains
    IPR050257 Eukaryotic ribosomal RNA-processing and assembly protein
    IPR016095 Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain
    IPR023674 Ribosomal protein uL1-like
    IPR028364 Ribosomal protein uL1/ribosomal biogenesis protein
  • GlyGen
    Q8BVY0 3 sites, 2 N-linked glycans (2 sites), 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 239
    cDNA 238
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2146694
References
more
  • Summaries
    All 35
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:332890 Wang W, et al., Karyopherin alpha deficiency contributes to human preimplantation embryo arrest. J Clin Invest. 2023 Jan 17;133(2)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory