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Prelid1 Gene Detail
Summary
  • Symbol
    Prelid1
  • Name
    PRELI domain containing 1
  • Synonyms
    2610524G07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913744
    NCBI Gene: 66494
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:55469868-55473085 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 29.80 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    109 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913744
 protein coding gene Chr13:55468313-55473085 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020590
 protein coding gene Chr13:54790729-54795439 (+)
A/J MGP_AJ_G0020544
 protein coding gene Chr13:52770555-52773771 (+)
AKR/J MGP_AKRJ_G0020522
 protein coding gene Chr13:54326156-54329372 (+)
BALB/cJ MGP_BALBcJ_G0020540
 protein coding gene Chr13:52997989-53001636 (+)
C3H/HeJ MGP_C3HHeJ_G0020339
 protein coding gene Chr13:54141329-54144545 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020974
 protein coding gene Chr13:56446182-56449836 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018556
 protein coding gene Chr13:50720439-50723831 (+)
CAST/EiJ MGP_CASTEiJ_G0019853
 protein coding gene Chr13:54230930-54233865 (+)
CBA/J MGP_CBAJ_G0020299
 protein coding gene Chr13:58604161-58607501 (+)
DBA/2J MGP_DBA2J_G0020422
 protein coding gene Chr13:52317502-52325092 (+)
FVB/NJ MGP_FVBNJ_G0020401
 protein coding gene Chr13:51793217-51796433 (+)
LP/J MGP_LPJ_G0020498
 protein coding gene Chr13:55054757-55057973 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020430
 protein coding gene Chr13:58085686-58088902 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021017
 protein coding gene Chr13:53913230-53918353 (+)
PWK/PhJ MGP_PWKPhJ_G0019609
 protein coding gene Chr13:52342454-52354049 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019436
 protein coding gene Chr13:52829368-52834637 (+)
WSB/EiJ MGP_WSBEiJ_G0019915
 protein coding gene Chr13:54267520-54270944 (+)



Homology
more
  • Human Ortholog
    PRELID1, PRELI domain containing 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRELID1, PRELI domain containing 1
  • Synonyms
    CGI-106, PRELI, PX19, SBBI12
  • Links
    NCBI Gene ID: 27166
    neXtProt AC: NX_Q9Y255
    UniProt: Q9Y255

  • Chr Location
    5q35.3; chr5:177303799-177306949 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    13 phenotype references
Mice homozygous for a B cell specific deletion of this gene are viable and fertile with no discernible B cell abnormalities.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    36
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    732
  • Tissues
    24
  • cDNA Data
    284
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66494 NCBI Gene Model | MGI Sequence Detail 3218 C57BL/6J ±  kb
transcript NM_025596 RefSeq | MGI Sequence Detail 1103 Not Specified  
polypeptide Q8R107 UniProt | EBI | MGI Sequence Detail 217 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 287
    cDNA 286
    Other 1

    Microarray probesets 6
References
more
  • Summaries
    All 42
    Developmental Gene Expression 4
    Diseases 1
    Gene Ontology 8
    Phenotypes 13
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory