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Rdm1 Gene Detail
Summary
  • Symbol
    Rdm1
  • Name
    RAD52 motif 1
  • Synonyms
    2410008M22Rik, Rad52b
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913849
    NCBI Gene: 66599
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:101518021-101526926 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 65.48 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    447 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913849
 protein coding gene Chr11:101517992-101526926 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019209
 protein coding gene Chr11:104524106-104536426 (+)
A/J MGP_AJ_G0019177
 protein coding gene Chr11:100120921-100130601 (+)
AKR/J MGP_AKRJ_G0019146
 protein coding gene Chr11:103231945-103240762 (+)
BALB/cJ MGP_BALBcJ_G0019151
 protein coding gene Chr11:100610965-100620322 (+)
C3H/HeJ MGP_C3HHeJ_G0018960
 protein coding gene Chr11:103414570-103423606 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019600
 protein coding gene Chr11:107791721-107803399 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017226
 protein coding gene Chr11:97566205-97573543 (+)
CAST/EiJ MGP_CASTEiJ_G0018514
 protein coding gene Chr11:104386334-104397627 (+)
CBA/J MGP_CBAJ_G0018929
 protein coding gene Chr11:112221277-112232148 (+)
DBA/2J MGP_DBA2J_G0019041
 protein coding gene Chr11:99644663-99653792 (+)
FVB/NJ MGP_FVBNJ_G0019031
 protein coding gene Chr11:99177555-99188540 (+)
LP/J MGP_LPJ_G0019110
 protein coding gene Chr11:105060307-105069714 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019062
 protein coding gene Chr11:111795063-111803974 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019638
 protein coding gene Chr11:103562099-103574596 (+)
PWK/PhJ MGP_PWKPhJ_G0018277
 protein coding gene Chr11:100701977-100711326 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018069
 protein coding gene Chr11:103303891-103313517 (+)
WSB/EiJ MGP_WSBEiJ_G0018563
 protein coding gene Chr11:103558041-103566927 (+)



Homology
more
  • Human Ortholog
    RDM1, RAD52 motif containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RDM1, RAD52 motif containing 1
  • Synonyms
    RAD52B
  • Links
    NCBI Gene ID: 201299
    neXtProt AC: NX_Q8NG50
    UniProt: Q8NG50

  • Chr Location
    17q12; chr17:35918066-35930773 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    755
  • Tissues
    25
  • cDNA Data
    60
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000010362 Ensembl Gene Model | MGI Sequence Detail 8906 C57BL/6J ±  kb
transcript ENSMUST00000010506 Ensembl | MGI Sequence Detail 1124 Not Applicable  
polypeptide ENSMUSP00000010506 Ensembl | MGI Sequence Detail 281 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 61
    cDNA 60
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2144510
References
more
  • Summaries
    All 37
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 9
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:237787 Liu X, et al., Decreased expression levels of Ifi genes is associated to the increased resistance to spontaneous arthritis disease in mice deficiency of IL-1RA. BMC Immunol. 2016 Aug 02;17(1):25
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory