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4933425D22Rik Gene Detail
Summary
  • Symbol
    4933425D22Rik
  • Name
    RIKEN cDNA 4933425D22 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1914009
    NCBI Gene: 66759
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:149365326-149367046 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    163 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914009
 lncRNA gene Chr5:149365326-149367046 (+)
129S1/SvImJ MGP_129S1SvImJ_G0037052
 sense intronic lncRNA gene Chr5:155269126-155270846 (+)
A/J MGP_AJ_G0037040
 sense intronic lncRNA gene Chr5:148644032-148645752 (+)
AKR/J MGP_AKRJ_G0036988
 sense intronic lncRNA gene Chr5:153229946-153231666 (+)
BALB/cJ MGP_BALBcJ_G0037031
 sense intronic lncRNA gene Chr5:149888506-149890226 (+)
C3H/HeJ MGP_C3HHeJ_G0036718
 sense intronic lncRNA gene Chr5:154225032-154226752 (+)
C57BL/6NJ MGP_C57BL6NJ_G0037543
 sense intronic lncRNA gene Chr5:160964545-160966265 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034590
 sense intronic lncRNA gene Chr5:142991981-142993782 (+)
CAST/EiJ MGP_CASTEiJ_G0035906
 sense intronic lncRNA gene Chr5:153843178-153844895 (+)
CBA/J MGP_CBAJ_G0036693
 sense intronic lncRNA gene Chr5:167729244-167730964 (+)
DBA/2J MGP_DBA2J_G0036868
 sense intronic lncRNA gene Chr5:148295887-148297607 (+)
FVB/NJ MGP_FVBNJ_G0036818
 sense intronic lncRNA gene Chr5:147552437-147554157 (+)
LP/J MGP_LPJ_G0036915
 sense intronic lncRNA gene Chr5:155959635-155961355 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036825
 sense intronic lncRNA gene Chr5:169847657-169849377 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037661
 sense intronic lncRNA gene Chr5:153166433-153168153 (+)
PWK/PhJ MGP_PWKPhJ_G0035598
 sense intronic lncRNA gene Chr5:147460279-147461999 (+)
SPRET/EiJ MGP_SPRETEiJ_G0035407
 sense intronic lncRNA gene Chr5:150475747-150477459 (+)
WSB/EiJ MGP_WSBEiJ_G0036106
 sense intronic lncRNA gene Chr5:153977535-153979255 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107164 Ensembl Gene Model | MGI Sequence Detail 1721 C57BL/6J ±  kb
transcript ENSMUST00000201035 Ensembl | MGI Sequence Detail 1721 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 3
Other
Accession IDs
less
MGI:2140942
References
more
  • Summaries
    All 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory