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Tex56 Gene Detail
Summary
  • Symbol
    Tex56
  • Name
    testis expressed 56
  • Synonyms
    4933417A18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914011
    NCBI Gene: 66761
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:35108392-35139858 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 14.22 cM, cytoband A4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    873 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914011
 protein coding gene Chr13:35108388-35140201 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020455
 protein coding gene Chr13:33065217-33098558 (+)
A/J MGP_AJ_G0020409
 protein coding gene Chr13:32067026-32107214 (+)
AKR/J MGP_AKRJ_G0020387
 protein coding gene Chr13:32840931-32874579 (+)
BALB/cJ MGP_BALBcJ_G0020405
 protein coding gene Chr13:32145601-32176977 (+)
C3H/HeJ MGP_C3HHeJ_G0020204
 protein coding gene Chr13:32769023-32801538 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020838
 protein coding gene Chr13:34188957-34300128 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018425
 protein coding gene Chr13:30370581-30403431 (+)
CAST/EiJ MGP_CASTEiJ_G0019719
 protein coding gene Chr13:32444226-32481153 (+)
CBA/J MGP_CBAJ_G0020165
 protein coding gene Chr13:35630882-35699018 (+)
DBA/2J MGP_DBA2J_G0020287
 protein coding gene Chr13:31607241-31639808 (+)
FVB/NJ MGP_FVBNJ_G0020266
 protein coding gene Chr13:31176681-31210964 (+)
LP/J MGP_LPJ_G0020362
 protein coding gene Chr13:33299849-33344017 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020296
 protein coding gene Chr13:35812319-35855954 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020881
 protein coding gene Chr13:32489370-32523306 (+)
PWK/PhJ MGP_PWKPhJ_G0019474
 protein coding gene Chr13:31742297-31776128 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019301
 protein coding gene Chr13:31131547-31200014 (+)
WSB/EiJ MGP_WSBEiJ_G0019781
 protein coding gene Chr13:32860069-32894111 (+)



Homology
more
  • Human Ortholog
    TEX56P, testis expressed 56, pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TEX56P, testis expressed 56, pseudogene
  • Synonyms
    C6orf201, dJ1013A10.5
  • Links
    NCBI Gene ID: 404220

  • Chr Location
    6p25.2; chr6:4079209-4130951 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    12 phenotype references
Male mice homozygous for a mutation are viable and show normal fertility.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021415 Ensembl Gene Model | MGI Sequence Detail 31467 C57BL/6J ±  kb
transcript ENSMUST00000160279 Ensembl | MGI Sequence Detail 1045 Not Applicable  
polypeptide ENSMUSP00000125324 Ensembl | MGI Sequence Detail 227 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR027827 Testis expressed protein 56
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
Other
Accession IDs
less
MGI:7316761
References
more
  • Summaries
    All 29
    Phenotypes 12
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:234235 Miyata H, et al., Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice. Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7704-10
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory