Aknaos MGI Mouse Gene Detail - MGI:1914033 - AT-hook transcription factor, opposite strand

Sequence Map

Chr4:63299595-63312255 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914033	antisense lncRNA gene	Chr4:63295348-63312256 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003908	antisense lncRNA gene	Chr4:62386786-62400015 (+)
A/J	MGP_AJ_G0003888	antisense lncRNA gene	Chr4:60145510-60158164 (+)
AKR/J	MGP_AKRJ_G0003865	antisense lncRNA gene	Chr4:61784889-61798148 (+)
BALB/cJ	MGP_BALBcJ_G0003874	antisense lncRNA gene	Chr4:60333894-60346587 (+)
C3H/HeJ	MGP_C3HHeJ_G0003821	antisense lncRNA gene	Chr4:62310031-62323254 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004022	antisense lncRNA gene	Chr4:64526557-64539234 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003513	antisense lncRNA gene	Chr4:57497054-57510282 (+)
CAST/EiJ	MGP_CASTEiJ_G0003785	antisense lncRNA gene	Chr4:60288723-60301775 (+)
CBA/J	MGP_CBAJ_G0003814	antisense lncRNA gene	Chr4:66789116-66804037 (+)
DBA/2J	MGP_DBA2J_G0003831	antisense lncRNA gene	Chr4:59998322-60011455 (+)
FVB/NJ	MGP_FVBNJ_G0003849	antisense lncRNA gene	Chr4:59274574-59289113 (+)
LP/J	MGP_LPJ_G0003910	antisense lncRNA gene	Chr4:62671027-62686184 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003837	antisense lncRNA gene	Chr4:69897884-69912527 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004017	antisense lncRNA gene	Chr4:61892119-61906125 (+)
PWK/PhJ	MGP_PWKPhJ_G0003740	antisense lncRNA gene	Chr4:58531843-58544727 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003686	antisense lncRNA gene	Chr4:59351974-59364837 (+)
WSB/EiJ	MGP_WSBEiJ_G0003820	antisense lncRNA gene	Chr4:61922093-61936770 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	ENSMUSG00000086953	Ensembl Gene Model \| MGI Sequence Detail	12661	C57BL/6J	± kb
transcript	ENSMUST00000144095	Ensembl \| MGI Sequence Detail	1104	Not Applicable
polypeptide	Q9D3S2	UniProt \| EBI \| MGI Sequence Detail	136	Not Applicable

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Summaries

All 15
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for Aknaos:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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