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Oma1 Gene Detail
Summary
  • Symbol
    Oma1
  • Name
    OMA1 zinc metallopeptidase
  • Synonyms
    2010001O09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914263
    NCBI Gene: 67013
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:103171009-103229065 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 47.60 cM, cytoband C6
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1610 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914263
 protein coding gene Chr4:103170991-103229066 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028508
 protein coding gene Chr4:103731742-103797533 (+)
A/J MGP_AJ_G0028471
 protein coding gene Chr4:100109245-100167970 (+)
AKR/J MGP_AKRJ_G0028418
 protein coding gene Chr4:102543445-102608413 (+)
BALB/cJ MGP_BALBcJ_G0028490
 protein coding gene Chr4:100306886-100366697 (+)
C3H/HeJ MGP_C3HHeJ_G0028204
 protein coding gene Chr4:103317186-103374615 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028930
 protein coding gene Chr4:107643360-107707123 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026221
 protein coding gene Chr4:95462186-95517374 (+)
CAST/EiJ MGP_CASTEiJ_G0027640
 protein coding gene Chr4:101081705-101144166 (+)
CBA/J MGP_CBAJ_G0028173
 protein coding gene Chr4:111050936-111123910 (+)
DBA/2J MGP_DBA2J_G0028321
 protein coding gene Chr4:99773686-99830337 (+)
FVB/NJ MGP_FVBNJ_G0028288
 protein coding gene Chr4:98616161-98672984 (+)
LP/J MGP_LPJ_G0028422
 protein coding gene Chr4:104009022-104063228 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028315
 protein coding gene Chr4:116495930-116558772 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028965
 protein coding gene Chr4:102752262-102821583 (+)
PWK/PhJ MGP_PWKPhJ_G0027366
 protein coding gene Chr4:97975878-98034397 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027190
 protein coding gene Chr4:100167573-100228681 (+)
WSB/EiJ MGP_WSBEiJ_G0027720
 protein coding gene Chr4:102926139-102986640 (+)



Homology
more
  • Human Ortholog
    OMA1, OMA1 zinc metallopeptidase
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OMA1, OMA1 zinc metallopeptidase
  • Synonyms
    2010001O09Rik, DAB1, MPRP-1, MPRP1, peptidase, YKR087C, ZMPOMA1
  • Links
    NCBI Gene ID: 115209
    neXtProt AC: NX_Q96E52
    UniProt: Q96E52

  • Chr Location
    1p32.2-p32.1; chr1:58415384-58546802 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    31 phenotypes from 2 alleles in 2 genetic backgrounds
    12 phenotypes from multigenic genotypes
    23 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a targeted allele exhibit increased susceptibility to diet-induced obesity and defective thermogenesis.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    44
  • GO References
    12
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    782
  • Tissues
    10
  • cDNA Data
    40
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000035069 Ensembl Gene Model | MGI Sequence Detail 58057 C57BL/6J ±  kb
    transcript ENSMUST00000035780 Ensembl | MGI Sequence Detail 1915 Not Applicable  
    polypeptide ENSMUSP00000045269 Ensembl | MGI Sequence Detail 521 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 40
      cDNA 40

      Microarray probesets 3
    References
    more
    • Summaries
      All 60
      Developmental Gene Expression 3
      Gene Ontology 12
      Phenotypes 23
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory