Mir22hg MGI Mouse Gene Detail - MGI:1914348 - Mir22 host gene (non-protein coding)

Symbol

Mir22hg
Name

Mir22 host gene (non-protein coding)
Synonyms

2210403K04Rik

Feature Type

lncRNA gene
IDs

MGI:1914348
NCBI Gene: 100042498
Alliance

gene page
Transcription Start Sites

7 TSS

Sequence Map

Chr11:75352365-75357502 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 11, 45.91 cM
Mapping Data

1 experiment

SNPs within 2kb

142 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914348	lncRNA gene	Chr11:75352365-75357516 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015185	unclassified non-coding RNA gene	Chr11:76208615-76213752 (+)
A/J	MGP_AJ_G0015159	unclassified non-coding RNA gene	Chr11:73376994-73382119 (+)
AKR/J	MGP_AKRJ_G0015122	unclassified non-coding RNA gene	Chr11:75596804-75601941 (+)
BALB/cJ	MGP_BALBcJ_G0015121	unclassified non-coding RNA gene	Chr11:73748194-73753331 (+)
C3H/HeJ	MGP_C3HHeJ_G0014945	unclassified non-coding RNA gene	Chr11:75613666-75619728 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015578	unclassified non-coding RNA gene	Chr11:78594141-78599278 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013321	unclassified non-coding RNA gene	Chr11:70386928-70392110 (+)
CAST/EiJ	MGP_CASTEiJ_G0014498	unclassified non-coding RNA gene	Chr11:76006605-76011712 (+)
CBA/J	MGP_CBAJ_G0014924	unclassified non-coding RNA gene	Chr11:82046443-82053561 (+)
DBA/2J	MGP_DBA2J_G0015017	unclassified non-coding RNA gene	Chr11:72981775-72986912 (+)
FVB/NJ	MGP_FVBNJ_G0015029	unclassified non-coding RNA gene	Chr11:72541522-72546659 (+)
LP/J	MGP_LPJ_G0015098	unclassified non-coding RNA gene	Chr11:76798182-76803319 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015055	unclassified non-coding RNA gene	Chr11:82612266-82617403 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015617	unclassified non-coding RNA gene	Chr11:75805997-75812036 (+)
PWK/PhJ	MGP_PWKPhJ_G0014290	unclassified non-coding RNA gene	Chr11:73677466-73682613 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014077	unclassified non-coding RNA gene	Chr11:75359046-75364098 (+)
WSB/EiJ	MGP_WSBEiJ_G0014601	unclassified non-coding RNA gene	Chr11:75613227-75618337 (+)

Human Ortholog

MIR22HG, MIR22 host gene

Vertebrate Orthologs

1

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

MIR22HG, MIR22 host gene
Synonyms

C17orf91
Links

HGNC:28219

NCBI Gene ID: 84981

UniProt: Q0VDD5
Chr Location

17p13.3; chr17:1711447-1717174 (-) GRCh38

MGI Vertebrate Homology

Mir22hg stringent orthology
1 human;1 mouse
HCOP

vertebrate homology predictions: MIR22HG
Gene Tree

Mir22hg

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Phenotype Summary

12 phenotype references

All Mutations and Alleles

7
Chemically induced (other)

1
Endonuclease-mediated

2
Gene trapped

2
Targeted

2
Genomic Mutations

2 involving Mir22hg
Find Mice (IMSR)

6 strains or lines available

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All GO Annotations

1
GO References

1

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

706
cDNA Data

39

Tissue x Stage Matrix

Other Mouse Links

GEO

Expression Atlas

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All Sequences

33
RefSeq

4

Ensembl

ENSMUSG00000085148 (Evidence)
NCBI Gene

100042498

Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000085148	Ensembl Gene Model \| MGI Sequence Detail	5138	C57BL/6J	± kb
	transcript	ENSMUST00000149940	Ensembl \| MGI Sequence Detail	1752	Not Applicable

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All nucleic 39

cDNA 39

Microarray probesets 1

Summaries

All 23

Gene Ontology 1

Phenotypes 12
Earliest

J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Latest

J:266382 Schweisgut J, et al., Sex-specific, reciprocal regulation of ERalpha and miR-22 controls muscle lipid metabolism in male mice. EMBO J. 2017 May 2;36(9):1199-1214

TSS for Mir22hg:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr102942	Chr11:75352424-75352435 (+)	65 bp
Tssr102943	Chr11:75352450-75352467 (+)	94 bp
Tssr102944	Chr11:75352488-75352491 (+)	125 bp
Tssr102945	Chr11:75352492-75352512 (+)	137 bp
Tssr102948	Chr11:75354752-75354769 (+)	2,396 bp
Tssr102949	Chr11:75354811-75354836 (+)	2,459 bp
Tssr102950	Chr11:75354872-75354942 (+)	2,542 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/19/2024 MGI 6.24