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Sft2d3 Gene Detail
Summary
  • Symbol
    Sft2d3
  • Name
    SFT2 domain containing 3
  • Synonyms
    2610206C24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914408
    NCBI Gene: 67158
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:32042151-32044877 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 17.88 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    151 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914408
 protein coding gene Chr18:32042147-32044956 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024219
 protein coding gene Chr18:30037401-30040212 (-)
A/J MGP_AJ_G0024185
 protein coding gene Chr18:29036192-29039003 (-)
AKR/J MGP_AKRJ_G0024154
 protein coding gene Chr18:29837243-29840051 (-)
BALB/cJ MGP_BALBcJ_G0024185
 protein coding gene Chr18:29128853-29131660 (-)
C3H/HeJ MGP_C3HHeJ_G0023953
 protein coding gene Chr18:29877012-29879819 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024627
 protein coding gene Chr18:31099402-31102211 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022068
 protein coding gene Chr18:29263015-29265792 (-)
CAST/EiJ MGP_CASTEiJ_G0023428
 protein coding gene Chr18:29770726-29773549 (-)
CBA/J MGP_CBAJ_G0023921
 protein coding gene Chr18:32063801-32066613 (-)
DBA/2J MGP_DBA2J_G0024053
 protein coding gene Chr18:28710503-28713314 (-)
FVB/NJ MGP_FVBNJ_G0024019
 protein coding gene Chr18:28413109-28415916 (-)
LP/J MGP_LPJ_G0024134
 protein coding gene Chr18:30116629-30119440 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024047
 protein coding gene Chr18:33411956-33414767 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024675
 protein coding gene Chr18:29704118-29706929 (-)
PWK/PhJ MGP_PWKPhJ_G0023171
 protein coding gene Chr18:28866508-28869307 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022980
 protein coding gene Chr18:29932573-29935384 (-)
WSB/EiJ MGP_WSBEiJ_G0023491
 protein coding gene Chr18:29606362-29609172 (-)



Homology
more
  • Human Ortholog
    SFT2D3, SFT2 domain containing 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SFT2D3, SFT2 domain containing 3
  • Links
    NCBI Gene ID: 84826
    neXtProt AC: NX_Q587I9
    UniProt: Q587I9

  • Chr Location
    2q14.3; chr2:127701497-127705242 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044982 Ensembl Gene Model | MGI Sequence Detail 2727 C57BL/6J ±  kb
transcript ENSMUST00000054984 Ensembl | MGI Sequence Detail 2727 Not Applicable  
polypeptide ENSMUSP00000100656 Ensembl | MGI Sequence Detail 212 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 4
Other
Accession IDs
less
MGI:2147271, MGI:2147339
References
more
  • Summaries
    All 24
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory