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Rrp15 Gene Detail
Summary
  • Symbol
    Rrp15
  • Name
    ribosomal RNA processing 15 homolog
  • Synonyms
    2810430M08Rik, 5430437H21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914473
    NCBI Gene: 67223
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:186453283-186481555 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 89.95 cM, cytoband H5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    882 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914473
 protein coding gene Chr1:186453175-186481555 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016920
 protein coding gene Chr1:193519327-193545605 (-)
A/J MGP_AJ_G0016899
 protein coding gene Chr1:185603967-185623020 (-)
AKR/J MGP_AKRJ_G0016864
 protein coding gene Chr1:191060911-191086198 (-)
BALB/cJ MGP_BALBcJ_G0016857
 protein coding gene Chr1:186275273-186300575 (-)
C3H/HeJ MGP_C3HHeJ_G0016681
 protein coding gene Chr1:191936030-191961299 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017320
 protein coding gene Chr1:199688377-199713695 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015027
 protein coding gene Chr1:176577930-176604454 (-)
CAST/EiJ MGP_CASTEiJ_G0016264
 protein coding gene Chr1:191411715-191438358 (-)
CBA/J MGP_CBAJ_G0016655
 protein coding gene Chr1:207142510-207170679 (-)
DBA/2J MGP_DBA2J_G0016761
 protein coding gene Chr1:184365734-184391017 (-)
FVB/NJ MGP_FVBNJ_G0016757
 protein coding gene Chr1:182453228-182472281 (-)
LP/J MGP_LPJ_G0016836
 protein coding gene Chr1:194691097-194717708 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016789
 protein coding gene Chr1:213968288-213987399 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017357
 protein coding gene Chr1:190961165-190986529 (-)
PWK/PhJ MGP_PWKPhJ_G0016051
 protein coding gene Chr1:183580691-183606546 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015827
 protein coding gene Chr1:189913390-189941136 (-)
WSB/EiJ MGP_WSBEiJ_G0016326
 protein coding gene Chr1:191133053-191158347 (-)



Homology
more
  • Human Ortholog
    RRP15, ribosomal RNA processing 15 homolog
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RRP15, ribosomal RNA processing 15 homolog
  • Synonyms
    CGI-115, KIAA0507
  • Links
    NCBI Gene ID: 51018
    neXtProt AC: NX_Q9Y3B9
    UniProt: Q9Y3B9

  • Chr Location
    1q41; chr1:218285293-218337983 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    756
  • Tissues
    45
  • cDNA Data
    37
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67223 NCBI Gene Model | MGI Sequence Detail 28273 C57BL/6J ±  kb
transcript NM_026041 RefSeq | MGI Sequence Detail 1228 C57BL/6  
polypeptide Q9CYX7 UniProt | EBI | MGI Sequence Detail 281 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 38
    cDNA 38

    Microarray probesets 2
Other
Accession IDs
less
MGI:1925390
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory