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Vstm2b Gene Detail
Summary
  • Symbol
    Vstm2b
  • Name
    V-set and transmembrane domain containing 2B
  • Synonyms
    2900093B09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914525
    NCBI Gene: 58188
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:40547614-40579468 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 27.88 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1092 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914525
 protein coding gene Chr7:40547614-40580018 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032105
 protein coding gene Chr7:40548381-40581304 (+)
A/J MGP_AJ_G0032085
 protein coding gene Chr7:39611794-39643967 (+)
AKR/J MGP_AKRJ_G0032018
 protein coding gene Chr7:40786513-40818749 (+)
BALB/cJ MGP_BALBcJ_G0032092
 protein coding gene Chr7:39861556-39896306 (+)
C3H/HeJ MGP_C3HHeJ_G0031809
 protein coding gene Chr7:41397710-41431024 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032570
 protein coding gene Chr7:42544586-42576837 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029603
 protein coding gene Chr7:40117749-40149450 (+)
CAST/EiJ MGP_CASTEiJ_G0031144
 protein coding gene Chr7:32537940-32572398 (+)
CBA/J MGP_CBAJ_G0031777
 protein coding gene Chr7:43878384-43911887 (+)
DBA/2J MGP_DBA2J_G0031929
 protein coding gene Chr7:39530428-39564593 (+)
FVB/NJ MGP_FVBNJ_G0031882
 protein coding gene Chr7:39267844-39300317 (+)
LP/J MGP_LPJ_G0032008
 protein coding gene Chr7:40941288-40974466 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031923
 protein coding gene Chr7:42655616-42689495 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032584
 protein coding gene Chr7:40136561-40173024 (+)
PWK/PhJ MGP_PWKPhJ_G0030866
 protein coding gene Chr7:32536293-32569612 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030702
 protein coding gene Chr7:28855345-28888658 (+)
WSB/EiJ MGP_WSBEiJ_G0031254
 protein coding gene Chr7:40579296-40611728 (+)



Homology
more
  • Human Ortholog
    VSTM2B, V-set and transmembrane domain containing 2B
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VSTM2B, V-set and transmembrane domain containing 2B
  • Links
    NCBI Gene ID: 342865
    neXtProt AC: NX_A6NLU5
    UniProt: A6NLU5

  • Chr Location
    19q12; chr19:29525418-29564551 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    755
  • Tissues
    9
  • cDNA Data
    7
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 58188 NCBI Gene Model | MGI Sequence Detail 31855 C57BL/6J ±  kb
transcript NM_001418632 RefSeq | MGI Sequence Detail 2335 C57BL/6  
polypeptide Q9JME9 UniProt | EBI | MGI Sequence Detail 285 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 7
    Primer pair 1
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1927557
References
more
  • Summaries
    All 27
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:64911 Inoue S, et al., Growth suppression of Escherichia coli by induction of expression of mammalian genes with transmembrane or ATPase domains. Biochem Biophys Res Commun. 2000 Feb 16;268(2):553-61
  • Latest
    J:331971 Martynova E, et al., Transcriptomic analysis and novel insights into lens fibre cell differentiation regulated by Gata3. Open Biol. 2019 Dec;9(12):190220
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory