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Ift22 Gene Detail
Summary
  • Symbol
    Ift22
  • Name
    intraflagellar transport 22
  • Synonyms
    3110017O03Rik, Rabl5
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914536
    NCBI Gene: 67286
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:136937004-136943363 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 76.03 cM, cytoband G1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    350 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914536
 protein coding gene Chr5:136937004-136944258 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030209
 protein coding gene Chr5:141607145-141611881 (+)
A/J MGP_AJ_G0030177
 protein coding gene Chr5:135477241-135482101 (+)
AKR/J MGP_AKRJ_G0030110
 protein coding gene Chr5:139860823-139865591 (+)
BALB/cJ MGP_BALBcJ_G0030187
 protein coding gene Chr5:136838295-136845458 (+)
C3H/HeJ MGP_C3HHeJ_G0029903
 protein coding gene Chr5:140484951-140490706 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030639
 protein coding gene Chr5:146877653-146882428 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027860
 protein coding gene Chr5:129750972-129759211 (+)
CAST/EiJ MGP_CASTEiJ_G0029313
 protein coding gene Chr5:139901129-139908312 (+)
CBA/J MGP_CBAJ_G0029873
 protein coding gene Chr5:152601103-152609753 (+)
DBA/2J MGP_DBA2J_G0030024
 protein coding gene Chr5:135372785-135378299 (+)
FVB/NJ MGP_FVBNJ_G0029979
 protein coding gene Chr5:134550327-134555257 (+)
LP/J MGP_LPJ_G0030113
 protein coding gene Chr5:142042358-142049097 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030011
 protein coding gene Chr5:155521970-155526688 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030680
 protein coding gene Chr5:139693371-139699418 (+)
PWK/PhJ MGP_PWKPhJ_G0029026
 protein coding gene Chr5:134458129-134466693 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028862
 protein coding gene Chr5:137277259-137286233 (+)
WSB/EiJ MGP_WSBEiJ_G0029386
 protein coding gene Chr5:140429278-140435197 (+)



Homology
more
  • Human Ortholog
    IFT22, intraflagellar transport 22
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IFT22, intraflagellar transport 22
  • Synonyms
    CFAP9, FAP9, RABL5
  • Links
    NCBI Gene ID: 64792
    neXtProt AC: NX_Q9H7X7
    UniProt: Q9H7X7

  • Chr Location
    7q22.1; chr7:101310914-101321823 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    765
  • Tissues
    22
  • cDNA Data
    5
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67286 NCBI Gene Model | MGI Sequence Detail 6360 C57BL/6J ±  kb
transcript NM_026073 RefSeq | MGI Sequence Detail 911 C57BL/6  
polypeptide Q9DAI2 UniProt | EBI | MGI Sequence Detail 185 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 5
Other
Accession IDs
less
MGI:2140970, MGI:2140982
References
more
  • Summaries
    All 35
    Developmental Gene Expression 1
    Gene Ontology 8
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory