P3r3urf MGI Mouse Gene Detail - MGI:1914573 - Pik3r3 upstream reading frame

Symbol

P3r3urf
Name

Pik3r3 upstream reading frame
Synonyms

1700042G07Rik

Feature Type

protein coding gene
IDs

MGI:1914573
NCBI Gene: 67323
Alliance

gene page
Transcription Start Sites

1 TSS

Sequence Map

Chr4:116030569-116031487 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 4, 53.10 cM
Mapping Data

1 experiment

SNPs within 2kb

101 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914573	protein coding gene	Chr4:116030569-116031494 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0028622	protein coding gene	Chr4:117028794-117029712 (+)
A/J	MGP_AJ_G0028583	protein coding gene	Chr4:112567885-112568803 (+)
AKR/J	MGP_AKRJ_G0028533	protein coding gene	Chr4:114985200-114986118 (+)
BALB/cJ	MGP_BALBcJ_G0028604	protein coding gene	Chr4:113199956-113200874 (+)
C3H/HeJ	MGP_C3HHeJ_G0028318	protein coding gene	Chr4:116559551-116560469 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0029045	protein coding gene	Chr4:121577796-121578714 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0026329	protein coding gene	Chr4:106616501-106617420 (+)
CAST/EiJ	MGP_CASTEiJ_G0027752	protein coding gene	Chr4:113788642-113789567 (+)
CBA/J	MGP_CBAJ_G0028285	protein coding gene	Chr4:124882439-124883357 (+)
DBA/2J	MGP_DBA2J_G0028433	protein coding gene	Chr4:113210133-113211051 (+)
FVB/NJ	MGP_FVBNJ_G0028401	protein coding gene	Chr4:111709273-111710191 (+)
LP/J	MGP_LPJ_G0028535	protein coding gene	Chr4:117248022-117248940 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0028428	protein coding gene	Chr4:129877385-129878303 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0029082	protein coding gene	Chr4:116143771-116144689 (+)
PWK/PhJ	MGP_PWKPhJ_G0027478	protein coding gene	Chr4:109979783-109980687 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0027301	protein coding gene	Chr4:112390460-112391367 (+)
WSB/EiJ	MGP_WSBEiJ_G0027831	protein coding gene	Chr4:116015473-116016391 (+)

Human Ortholog

P3R3URF, PIK3R3 upstream open reading frame

Vertebrate Orthologs

2

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

P3R3URF, PIK3R3 upstream open reading frame
Links

HGNC:53451

NCBI Gene ID: 110117498

neXtProt AC: NX_A0A087WWA1

UniProt: A0A087WWA1
Chr Location

chr1:46175486-46176488 (-) GRCh38

MGI Vertebrate Homology

P3r3urf stringent orthology
1 human;1 mouse;1 rat
HCOP

vertebrate homology predictions: P3R3URF
Gene Tree

P3r3urf

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Phenotype Summary

6 phenotype references

All Mutations and Alleles

4
Chemically induced (other)

2
Radiation induced

1
Targeted

1
Genomic Mutations

4 involving P3r3urf
Find Mice (IMSR)

6 strains or lines available

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All GO Annotations

1
GO References

1

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

706
cDNA Data

11

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas

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All Sequences

32
RefSeq

3
UniProt

1
CCDS

CCDS51276.1

Ensembl

ENSMUSG00000078593 (Evidence)
NCBI Gene

67323

			Length	Strain/Species	Flank
genomic	ENSMUSG00000078593	Ensembl Gene Model \| MGI Sequence Detail	919	C57BL/6J	± kb
transcript	ENSMUST00000106492	Ensembl \| MGI Sequence Detail	385	Not Applicable
polypeptide	ENSMUSP00000102101	Ensembl \| MGI Sequence Detail	90	Not Applicable

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UniProt

1 Sequence
Protein Ontology

PR:000059647 PIK3R3 upstream open reading frame protein

(term hierarchy)

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All nucleic 11

cDNA 11

Microarray probesets 2

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MGI:6507869

Summaries

All 24

Gene Ontology 1

Phenotypes 6
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for P3r3urf:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38507	Chr4:116030561-116030577 (+)	0 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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