Kcnmb4os1 Gene Detail

Summary

• Symbol
  Kcnmb4os1
• Name
  potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1
• Synonyms
  1700058G18Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1914592
  NCBI Gene: 67342
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr10:116254026-116257140 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 64.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914592	antisense lncRNA gene	Chr10:116253957-116257142 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002899	antisense lncRNA gene	Chr10:119191452-119194637 (+)
A/J	MGP_AJ_G0002876	antisense lncRNA gene	Chr10:114608013-114611198 (+)
AKR/J	MGP_AKRJ_G0002857	antisense lncRNA gene	Chr10:117930103-117933288 (+)
BALB/cJ	MGP_BALBcJ_G0002864	antisense lncRNA gene	Chr10:115008665-115011850 (+)
C3H/HeJ	MGP_C3HHeJ_G0002820	antisense lncRNA gene	Chr10:118155183-118159661 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003007	antisense lncRNA gene	Chr10:123336593-123339778 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002549	antisense lncRNA gene	Chr10:109211257-109214491 (+)
CAST/EiJ	MGP_CASTEiJ_G0002792	antisense lncRNA gene	Chr10:118435794-118441442 (+)
CBA/J	MGP_CBAJ_G0002816	antisense lncRNA gene	Chr10:128158697-128161882 (+)
DBA/2J	MGP_DBA2J_G0002823	antisense lncRNA gene	Chr10:113749588-113752773 (+)
FVB/NJ	MGP_FVBNJ_G0002842	antisense lncRNA gene	Chr10:112704407-112707563 (+)
LP/J	MGP_LPJ_G0002899	antisense lncRNA gene	Chr10:119775966-119779151 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002831	antisense lncRNA gene	Chr10:131064728-131067913 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003010	antisense lncRNA gene	Chr10:117995255-117999498 (+)
PWK/PhJ	MGP_PWKPhJ_G0002750	antisense lncRNA gene	Chr10:113834521-113837770 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002699	antisense lncRNA gene	Chr10:116803060-116807250 (+)
WSB/EiJ	MGP_WSBEiJ_G0002821	antisense lncRNA gene	Chr10:118175064-118178249 (+)

Homology

• Gene Tree
  Kcnmb4os1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Kcnmb4os1
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000020164 (Evidence)
• NCBI Gene
  67342

Representative Sequences			Length	Strain/Species
genomic	67342	NCBI Gene Model | MGI Sequence Detail	3115	C57BL/6J
transcript	NR_028107	RefSeq | MGI Sequence Detail	753	C57BL/6
polypeptide	Q9D9J6	UniProt | EBI | MGI Sequence Detail	111	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 2

References

• Summaries
  All 20

  Phenotypes 7
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Kcnmb4os1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr95869	Chr10:116253953-116254008 (+)	-45 bp
Tssr95870	Chr10:116254022-116254042 (+)	6 bp
Tssr95871	Chr10:116254044-116254053 (+)	23 bp