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4921536K21Rik Gene Detail
Summary
  • Symbol
    4921536K21Rik
  • Name
    RIKEN cDNA 4921536K21 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914680
    NCBI Gene: 67430
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:3836088-3845098 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 2.73 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    258 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914680
 protein coding gene Chr11:3836087-3845308 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017964
 protein coding gene Chr11:788239-805259 (-)
A/J MGP_AJ_G0017937
 protein coding gene Chr11:819282-828214 (-)
AKR/J MGP_AKRJ_G0017901
 protein coding gene Chr11:846342-855344 (-)
BALB/cJ MGP_BALBcJ_G0017905
 protein coding gene Chr11:783866-792862 (-)
C3H/HeJ MGP_C3HHeJ_G0017718
 protein coding gene Chr11:774065-784012 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018358
 protein coding gene Chr11:865483-875257 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016017
 protein coding gene Chr11:714693-724241 (-)
CAST/EiJ MGP_CASTEiJ_G0017280
 protein coding gene Chr11:743951-752982 (-)
CBA/J MGP_CBAJ_G0017693
 protein coding gene Chr11:1072597-1084339 (-)
DBA/2J MGP_DBA2J_G0017804
 protein coding gene Chr11:725136-734200 (-)
FVB/NJ MGP_FVBNJ_G0017795
 protein coding gene Chr11:761657-770833 (-)
LP/J MGP_LPJ_G0017874
 protein coding gene Chr11:876020-886356 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017821
 protein coding gene Chr11:779687-789860 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018397
 protein coding gene Chr11:862520-874387 (-)
PWK/PhJ MGP_PWKPhJ_G0017061
 protein coding gene Chr11:717786-727121 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016857
 protein coding gene Chr11:819688-830209 (-)
WSB/EiJ MGP_WSBEiJ_G0017334
 protein coding gene Chr11:744659-754946 (-)



Homology
more
  • Human Ortholog
    C5orf52, chromosome 5 open reading frame 52
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C5orf52, chromosome 5 open reading frame 52
  • Links
    NCBI Gene ID: 100190949
    neXtProt AC: NX_A6NGY3
    UniProt: A6NGY3

  • Chr Location
    5q33.3; chr5:157670941-157680158 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    11
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020434 Ensembl Gene Model | MGI Sequence Detail 9011 C57BL/6J ±  kb
    transcript ENSMUST00000020712 Ensembl | MGI Sequence Detail 2590 Not Applicable  
    polypeptide ENSMUSP00000020712 Ensembl | MGI Sequence Detail 168 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 12
      cDNA 12

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:2144455
    References
    more
    • Summaries
      All 24
      Phenotypes 5
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory