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Tmem183a Gene Detail
Summary
  • Symbol
    Tmem183a
  • Name
    transmembrane protein 183A
  • Synonyms
    1300007B12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914729
    NCBI Gene: 57439
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:134273835-134289717 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 58.20 cM, cytoband E4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    361 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914729
 protein coding gene Chr1:134273834-134289765 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016504
 protein coding gene Chr1:138002486-138019360 (-)
A/J MGP_AJ_G0016487
 protein coding gene Chr1:132809151-132824805 (-)
AKR/J MGP_AKRJ_G0016452
 protein coding gene Chr1:136770046-136786873 (-)
BALB/cJ MGP_BALBcJ_G0016447
 protein coding gene Chr1:133144313-133160011 (-)
C3H/HeJ MGP_C3HHeJ_G0016273
 protein coding gene Chr1:136872581-136889137 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016908
 protein coding gene Chr1:143035545-143051212 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014619
 protein coding gene Chr1:125951722-125967349 (-)
CAST/EiJ MGP_CASTEiJ_G0015853
 protein coding gene Chr1:135921340-135939585 (-)
CBA/J MGP_CBAJ_G0016246
 protein coding gene Chr1:147986676-148005423 (-)
DBA/2J MGP_DBA2J_G0016352
 protein coding gene Chr1:131820690-131836635 (-)
FVB/NJ MGP_FVBNJ_G0016351
 protein coding gene Chr1:130449911-130466181 (-)
LP/J MGP_LPJ_G0016423
 protein coding gene Chr1:139279413-139294929 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016376
 protein coding gene Chr1:153681772-153699717 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016944
 protein coding gene Chr1:136498560-136515655 (-)
PWK/PhJ MGP_PWKPhJ_G0015639
 protein coding gene Chr1:130840919-130856395 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015426
 protein coding gene Chr1:135466854-135482234 (-)
WSB/EiJ MGP_WSBEiJ_G0015916
 protein coding gene Chr1:136534269-136552981 (-)



Homology
more
  • Human Ortholog
    TMEM183A, transmembrane protein 183A
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM183A, transmembrane protein 183A
  • Synonyms
    C1orf37
  • Links
    NCBI Gene ID: 92703
    neXtProt AC: NX_Q8IXX5
    UniProt: Q8IXX5

  • Chr Location
    1q32.1; chr1:203007374-203024848 (+)  GRCh38
  • Human Ortholog
    TMEM183BP, transmembrane protein 183B, pseudogene
  • Synonyms
    C1orf37-DUP, C1ORF37DUP, TMEM183B
  • Links
    NCBI Gene ID: 653659
    neXtProt AC: NX_Q1AE95
    UniProt: Q1AE95

  • Chr Location
    3q25.1; chr3:149982181-149983308 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    156
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000042305 Ensembl Gene Model | MGI Sequence Detail 15883 C57BL/6J ±  kb
transcript ENSMUST00000049470 Ensembl | MGI Sequence Detail 3149 Not Applicable  
polypeptide ENSMUSP00000046786 Ensembl | MGI Sequence Detail 375 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 156
    cDNA 156

    Microarray probesets 5
Other
Accession IDs
less
MGI:1922885
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:163097 Thoren LA, et al., UPF2 is a critical regulator of liver development, function and regeneration. PLoS One. 2010;5(7):e11650
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory