1700094J05Rik Gene Detail

Summary

• Symbol
  1700094J05Rik
• Name
  RIKEN cDNA 1700094J05 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1914773
  NCBI Gene: 67523
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:76224849-76237341 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  312 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914773	lncRNA gene	Chr10:76224849-76237341 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002870	antisense lncRNA gene	Chr10:76625412-76638836 (+)
A/J	MGP_AJ_G0002847	antisense lncRNA gene	Chr10:73979466-73991923 (+)
AKR/J	MGP_AKRJ_G0002827	antisense lncRNA gene	Chr10:75975916-75988403 (+)
BALB/cJ	MGP_BALBcJ_G0002834	antisense lncRNA gene	Chr10:74184367-74196830 (+)
C3H/HeJ	MGP_C3HHeJ_G0002791	antisense lncRNA gene	Chr10:76050524-76064600 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002977	antisense lncRNA gene	Chr10:79338066-79352057 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002520	antisense lncRNA gene	Chr10:70428924-70440091 (+)
CAST/EiJ	MGP_CASTEiJ_G0002763	antisense lncRNA gene	Chr10:76361162-76376706 (+)
CBA/J	MGP_CBAJ_G0002786	antisense lncRNA gene	Chr10:82434455-82452073 (+)
DBA/2J	MGP_DBA2J_G0002793	antisense lncRNA gene	Chr10:73288752-73301204 (+)
FVB/NJ	MGP_FVBNJ_G0002813	antisense lncRNA gene	Chr10:72443813-72456789 (+)
LP/J	MGP_LPJ_G0002869	antisense lncRNA gene	Chr10:77127266-77139446 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002803	antisense lncRNA gene	Chr10:84499980-84513072 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002980	antisense lncRNA gene	Chr10:76030252-76043810 (+)
PWK/PhJ	MGP_PWKPhJ_G0002721	antisense lncRNA gene	Chr10:73123077-73136186 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002670	antisense lncRNA gene	Chr10:75257786-75270471 (+)
WSB/EiJ	MGP_WSBEiJ_G0002792	antisense lncRNA gene	Chr10:76010396-76023886 (+)

Homology

• Gene Tree
  1700094J05Rik
  

Human Diseases

• References
  2 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  31 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  1
• Endonuclease-mediated
  1
• Targeted
  4
• Genomic Mutations
  5 involving 1700094J05Rik
• Find Mice (IMSR)
  3 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000101695 (Evidence)
• NCBI Gene
  67523

Representative Sequences			Length	Strain/Species
genomic	67523	NCBI Gene Model | MGI Sequence Detail	12493	C57BL/6J
transcript	NR_040580	RefSeq | MGI Sequence Detail	997	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 38

  Diseases 2

  Phenotypes 31
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:351211 Wu Y, et al., Cathepsin B abundance, activity and microglial localisation in Alzheimer's disease-Down syndrome and early onset Alzheimer's disease; the role of elevated cystatin B. Acta Neuropathol Commun. 2023 Aug 14;11(1):132

TSS for 1700094J05Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr94172	Chr10:76224671-76224681 (+)	-173 bp