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Mgat4c Gene Detail
Summary
  • Symbol
    Mgat4c
  • Name
    MGAT4 family, member C
  • Synonyms
    9130411I17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914819
    NCBI Gene: 67569
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:101517348-102227330 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 52.92 cM, cytoband D1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    24479 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914819
 protein coding gene Chr10:101517348-102227712 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017694
 protein coding gene Chr10:103598086-104370588 (+)
A/J MGP_AJ_G0017673
 protein coding gene Chr10:99831884-100549908 (+)
AKR/J MGP_AKRJ_G0017635
 protein coding gene Chr10:102723040-103497136 (+)
BALB/cJ MGP_BALBcJ_G0017637
 protein coding gene Chr10:100135875-100878610 (+)
C3H/HeJ MGP_C3HHeJ_G0017462
 protein coding gene Chr10:102764867-103519937 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018094
 protein coding gene Chr10:107243774-108044064 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015773
 protein coding gene Chr10:95155689-95828803 (+)
CAST/EiJ MGP_CASTEiJ_G0017023
 protein coding gene Chr10:102773288-103558622 (+)
CBA/J MGP_CBAJ_G0017431
 protein coding gene Chr10:111269507-112141190 (+)
DBA/2J MGP_DBA2J_G0017536
 protein coding gene Chr10:98913026-99648478 (+)
FVB/NJ MGP_FVBNJ_G0017530
 protein coding gene Chr10:98021706-98742084 (+)
LP/J MGP_LPJ_G0017610
 protein coding gene Chr10:104226448-104987999 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017560
 protein coding gene Chr10:112745859-113815240 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018132
 protein coding gene Chr10:102658537-103426298 (+)
PWK/PhJ MGP_PWKPhJ_G0016805
 protein coding gene Chr10:98991672-99741458 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016595
 protein coding gene Chr10:101468255-102252228 (+)
WSB/EiJ MGP_WSBEiJ_G0017083
 protein coding gene Chr10:102696484-103460269 (+)



Homology
more
  • Human Ortholog
    MGAT4C, MGAT4 family member C
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MGAT4C, MGAT4 family member C
  • Synonyms
    GNTIVH, HGNT-IV-H
  • Links
    NCBI Gene ID: 25834
    neXtProt AC: NX_Q9UBM8
    UniProt: Q9UBM8

  • Chr Location
    12q21.31-q21.32; chr12:85955666-86839000 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    800
  • Tissues
    94
  • cDNA Data
    12
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000019888 Ensembl Gene Model | MGI Sequence Detail 709983 C57BL/6J ±  kb
transcript ENSMUST00000120748 Ensembl | MGI Sequence Detail 2603 Not Applicable  
polypeptide ENSMUSP00000114010 Ensembl | MGI Sequence Detail 478 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 3
References
more
  • Summaries
    All 38
    Developmental Gene Expression 3
    Gene Ontology 6
    Phenotypes 11
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory