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Stmp1 Gene Detail
Summary
  • Symbol
    Stmp1
  • Name
    short transmembrane mitochondrial protein 1
  • Synonyms
    1810058I24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914955
    NCBI Gene: 67705
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:35229645-35238574 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 15.26 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    336 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914955
 protein coding gene Chr6:35229589-35240431 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006938
 lincRNA gene Chr6:33398407-33409273 (+)
A/J MGP_AJ_G0006932
 lincRNA gene Chr6:31947935-31958719 (+)
AKR/J MGP_AKRJ_G0006902
 lincRNA gene Chr6:33021279-33032153 (+)
BALB/cJ MGP_BALBcJ_G0006908
 lincRNA gene Chr6:32134498-32148635 (+)
C3H/HeJ MGP_C3HHeJ_G0006853
 lincRNA gene Chr6:32992006-33003314 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007073
 lincRNA gene Chr6:34218890-34230041 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006319
 lincRNA gene Chr6:30032039-30042936 (+)
CAST/EiJ MGP_CASTEiJ_G0006770
 lincRNA gene Chr6:32833591-32844489 (+)
CBA/J MGP_CBAJ_G0006835
 lincRNA gene Chr6:35567536-35580668 (+)
DBA/2J MGP_DBA2J_G0006855
 lincRNA gene Chr6:31823594-31834413 (+)
FVB/NJ MGP_FVBNJ_G0006878
 lincRNA gene Chr6:31622414-31633201 (+)
LP/J MGP_LPJ_G0006938
 lincRNA gene Chr6:33498551-33509369 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006859
 lincRNA gene Chr6:37857388-37869066 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007075
 lincRNA gene Chr6:32904681-32915560 (+)
PWK/PhJ MGP_PWKPhJ_G0006712
 lincRNA gene Chr6:31457623-31473412 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006620
 lincRNA gene Chr6:32593943-32603584 (+)
WSB/EiJ MGP_WSBEiJ_G0006825
 lincRNA gene Chr6:32852386-32864189 (+)



Homology
more
  • Human Ortholog
    STMP1, short transmembrane mitochondrial protein 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    STMP1, short transmembrane mitochondrial protein 1
  • Synonyms
    C7orf73, Mm47, Mtlbn, PL-5283
  • Links
    NCBI Gene ID: 647087
    neXtProt AC: NX_E0CX11
    UniProt: E0CX11

  • Chr Location
    7q33; chr7:135662496-135693418 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotypes from 2 alleles in 2 genetic backgrounds
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous null mice show normal cardiac function but cardiac mitochondria show altered complex III assembly dynamics and reduced complex III activity.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    722
  • Tissues
    11
  • cDNA Data
    74
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      54
    • RefSeq
      7
    • UniProt
      3
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 67705 NCBI Gene Model | MGI Sequence Detail 8930 C57BL/6J ±  kb
    transcript NR_169139 RefSeq | MGI Sequence Detail 2728 C57BL/6  
    polypeptide P0DP99 UniProt | EBI | MGI Sequence Detail 47 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      3 Sequences
    • InterPro Domains
      IPR027854 Short transmembrane mitochondrial protein 1
    Molecular
    Reagents
    less
    • All nucleic 76
      cDNA 75
      Primer pair 1

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:1889816, MGI:2141495, MGI:7384679
    References
    more
    • Summaries
      All 30
      Developmental Gene Expression 1
      Gene Ontology 6
      Phenotypes 7
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:339742 Zheng X, et al., A lncRNA-encoded mitochondrial micropeptide exacerbates microglia-mediated neuroinflammation in retinal ischemia/reperfusion injury. Cell Death Dis. 2023 Feb 15;14(2):126
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/05/2024
    MGI 6.24     		The Jackson Laboratory