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Mansc1 Gene Detail
Summary
  • Symbol
    Mansc1
  • Name
    MANSC domain containing 1
  • Synonyms
    9130403P13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914979
    NCBI Gene: 67729
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:134586170-134609451 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 65.75 cM, cytoband G1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    934 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914979
 protein coding gene Chr6:134586170-134609451 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031405
 protein coding gene Chr6:138877344-138899610 (-)
A/J MGP_AJ_G0031381
 protein coding gene Chr6:133445008-133468099 (-)
AKR/J MGP_AKRJ_G0031308
 protein coding gene Chr6:137487908-137514203 (-)
BALB/cJ MGP_BALBcJ_G0031387
 protein coding gene Chr6:133259661-133283430 (-)
C3H/HeJ MGP_C3HHeJ_G0031109
 protein coding gene Chr6:137536455-137561269 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031847
 protein coding gene Chr6:142645778-142676566 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028979
 protein coding gene Chr6:132589571-132611505 (-)
CAST/EiJ MGP_CASTEiJ_G0030478
 protein coding gene Chr6:136925179-136950056 (-)
CBA/J MGP_CBAJ_G0031068
 protein coding gene Chr6:147980660-148008218 (-)
DBA/2J MGP_DBA2J_G0031226
 protein coding gene Chr6:132289792-132316091 (-)
FVB/NJ MGP_FVBNJ_G0031176
 protein coding gene Chr6:131209835-131232590 (-)
LP/J MGP_LPJ_G0031310
 protein coding gene Chr6:138997978-139017849 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031216
 protein coding gene Chr6:152029461-152054292 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031880
 protein coding gene Chr6:137230959-137255211 (-)
PWK/PhJ MGP_PWKPhJ_G0030203
 protein coding gene Chr6:130774065-130800544 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030027
 protein coding gene Chr6:135395980-135424981 (-)
WSB/EiJ MGP_WSBEiJ_G0030569
 protein coding gene Chr6:137859139-137886011 (-)



Homology
more
  • Human Ortholog
    MANSC1, MANSC domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MANSC1, MANSC domain containing 1
  • Synonyms
    9130403P13Rik, LOH12CR3
  • Links
    NCBI Gene ID: 54682
    neXtProt AC: NX_Q9H8J5
    UniProt: Q9H8J5

  • Chr Location
    12p13.2; chr12:12326056-12350242 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    800
  • Tissues
    94
  • cDNA Data
    27
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67729 NCBI Gene Model | MGI Sequence Detail 23282 C57BL/6J ±  kb
transcript NM_026345 RefSeq | MGI Sequence Detail 2405 Not Specified  
polypeptide Q9CR33 UniProt | EBI | MGI Sequence Detail 414 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 29
    cDNA 28
    Other 1

    Microarray probesets 3
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory