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Yju2b Gene Detail
Summary
  • Symbol
    Yju2b
  • Name
    YJU2 splicing factor homolog B
  • Synonyms
    4930527D15Rik, Ccdc130
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914986
    NCBI Gene: 67736
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:84984424-84997009 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 40.77 cM, cytoband C3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    379 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914986
 protein coding gene Chr8:84984396-84997087 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033862
 protein coding gene Chr8:85138721-85151023 (-)
A/J MGP_AJ_G0033845
 protein coding gene Chr8:81803192-81815289 (-)
AKR/J MGP_AKRJ_G0033771
 protein coding gene Chr8:84227855-84240175 (-)
BALB/cJ MGP_BALBcJ_G0033838
 protein coding gene Chr8:81910118-81922258 (-)
C3H/HeJ MGP_C3HHeJ_G0033548
 protein coding gene Chr8:84833335-84845633 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034358
 protein coding gene Chr8:88402412-88414485 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031300
 protein coding gene Chr8:75598952-75611529 (-)
CAST/EiJ MGP_CASTEiJ_G0032878
 protein coding gene Chr8:84254004-84266598 (-)
CBA/J MGP_CBAJ_G0033524
 protein coding gene Chr8:91501087-91513384 (-)
DBA/2J MGP_DBA2J_G0033678
 protein coding gene Chr8:81440618-81452719 (-)
FVB/NJ MGP_FVBNJ_G0033625
 protein coding gene Chr8:80377020-80389113 (-)
LP/J MGP_LPJ_G0033769
 protein coding gene Chr8:85250901-85265730 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033667
 protein coding gene Chr8:94018350-94030431 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034375
 protein coding gene Chr8:84199993-84212061 (-)
PWK/PhJ MGP_PWKPhJ_G0032582
 protein coding gene Chr8:80666430-80679042 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032418
 protein coding gene Chr8:83016912-83029564 (-)
WSB/EiJ MGP_WSBEiJ_G0032991
 protein coding gene Chr8:84612899-84625029 (-)



Homology
more
  • Human Ortholog
    YJU2B, YJU2 splicing factor homolog B
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    YJU2B, YJU2 splicing factor homolog B
  • Synonyms
    CCDC130
  • Links
    NCBI Gene ID: 81576
    neXtProt AC: NX_P13994
    UniProt: P13994

  • Chr Location
    19p13.13; chr19:13731752-13763296 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    40 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    35
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000004994 Ensembl Gene Model | MGI Sequence Detail 12586 C57BL/6J ±  kb
transcript ENSMUST00000098578 Ensembl | MGI Sequence Detail 2119 Not Applicable  
polypeptide ENSMUSP00000096177 Ensembl | MGI Sequence Detail 385 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 35
    cDNA 35

    Microarray probesets 3
Other
Accession IDs
less
MGI:2142844, MGI:7414072
References
more
  • Summaries
    All 65
    Gene Ontology 4
    Phenotypes 40
  • Earliest
    J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
  • Latest
    J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory