4930589P08Rik MGI Mouse Gene Detail - MGI:1914998

Sequence Map

Chr4:151460927-151464039 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914998	lncRNA gene	Chr4:151460927-151464039 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004011	antisense lncRNA gene	Chr4:155421630-155424734 (+)
A/J	MGP_AJ_G0003992	antisense lncRNA gene	Chr4:148892995-148896107 (+)
AKR/J	MGP_AKRJ_G0003969	antisense lncRNA gene	Chr4:152963615-152966725 (+)
BALB/cJ	MGP_BALBcJ_G0003978	antisense lncRNA gene	Chr4:149386153-149389265 (+)
C3H/HeJ	MGP_C3HHeJ_G0003925	antisense lncRNA gene	Chr4:153532152-153535262 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004127	antisense lncRNA gene	Chr4:160995811-160998923 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003608	antisense lncRNA gene	Chr4:141272117-141275254 (+)
CAST/EiJ	MGP_CASTEiJ_G0003888	antisense lncRNA gene	Chr4:150823517-150826623 (+)
CBA/J	MGP_CBAJ_G0003918	antisense lncRNA gene	Chr4:165783615-165786725 (+)
DBA/2J	MGP_DBA2J_G0003934	antisense lncRNA gene	Chr4:148966975-148970085 (+)
FVB/NJ	MGP_FVBNJ_G0003953	antisense lncRNA gene	Chr4:148114566-148117676 (+)
LP/J	MGP_LPJ_G0004014	antisense lncRNA gene	Chr4:155350496-155353606 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003941	antisense lncRNA gene	Chr4:168875280-168878390 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004121	antisense lncRNA gene	Chr4:153494257-153497369 (+)
PWK/PhJ	MGP_PWKPhJ_G0003842	antisense lncRNA gene	Chr4:145006180-145009290 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003787	antisense lncRNA gene	Chr4:147739061-147741795 (+)
WSB/EiJ	MGP_WSBEiJ_G0003924	antisense lncRNA gene	Chr4:153638498-153641610 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000085593	Ensembl Gene Model \| MGI Sequence Detail	3113	C57BL/6J	± kb
	transcript	ENSMUST00000129097	Ensembl \| MGI Sequence Detail	1084	Not Applicable

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Summaries

All 11

Phenotypes 3
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:196071 van der Weyden L, et al., Cancer of mice and men: old twists and new tails. J Pathol. 2013 May;230(1):4-16

TSS for 4930589P08Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr40474	Chr4:151460886-151460939 (+)	-14 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/19/2024 MGI 6.24