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Ubxn4 Gene Detail
Summary
  • Symbol
    Ubxn4
  • Name
    UBX domain protein 4
  • Synonyms
    1300013G12Rik, Ubxd2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915062
    NCBI Gene: 67812
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:128171701-128207115 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 55.80 cM, cytoband E4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    842 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915062
 protein coding gene Chr1:128171635-128207115 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016427
 protein coding gene Chr1:131480322-131516306 (+)
A/J MGP_AJ_G0016410
 protein coding gene Chr1:126576676-126612858 (+)
AKR/J MGP_AKRJ_G0016375
 protein coding gene Chr1:130323536-130361573 (+)
BALB/cJ MGP_BALBcJ_G0016370
 protein coding gene Chr1:126949973-126988597 (+)
C3H/HeJ MGP_C3HHeJ_G0016196
 protein coding gene Chr1:130485973-130525735 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016831
 protein coding gene Chr1:136420500-136456926 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014544
 protein coding gene Chr1:119934427-119970197 (+)
CAST/EiJ MGP_CASTEiJ_G0015777
 protein coding gene Chr1:129457448-129501093 (+)
CBA/J MGP_CBAJ_G0016169
 protein coding gene Chr1:141014907-141054009 (+)
DBA/2J MGP_DBA2J_G0016275
 protein coding gene Chr1:125613950-125649944 (+)
FVB/NJ MGP_FVBNJ_G0016274
 protein coding gene Chr1:124327704-124367694 (+)
LP/J MGP_LPJ_G0016346
 protein coding gene Chr1:132824799-132865568 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016299
 protein coding gene Chr1:146867873-146911017 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016867
 protein coding gene Chr1:130095925-130131855 (+)
PWK/PhJ MGP_PWKPhJ_G0015563
 protein coding gene Chr1:124583383-124620760 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015351
 protein coding gene Chr1:129052955-129093072 (+)
WSB/EiJ MGP_WSBEiJ_G0015839
 protein coding gene Chr1:130043068-130092439 (+)



Homology
more
  • Human Ortholog
    UBXN4, UBX domain protein 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    UBXN4, UBX domain protein 4
  • Synonyms
    erasin, UBXD2, UBXDC1
  • Links
    NCBI Gene ID: 23190
    neXtProt AC: NX_Q92575
    UniProt: Q92575

  • Chr Location
    2q21.3; chr2:135741734-135785056 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    5
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    20
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000026353 Ensembl Gene Model | MGI Sequence Detail 35415 C57BL/6J ±  kb
transcript ENSMUST00000027592 Ensembl | MGI Sequence Detail 4113 Not Applicable  
polypeptide ENSMUSP00000027592 Ensembl | MGI Sequence Detail 506 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 9
References
more
  • Summaries
    All 36
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 10
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory