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Lockd Gene Detail
Summary
  • Symbol
    Lockd
  • Name
    lncRNA downstream of Cdkn1b
  • Synonyms
    1190002F15Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915081
    NCBI Gene: 381822
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:134906055-134928681 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    738 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915081
 lncRNA gene Chr6:134906055-134933761 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007080
 lincRNA gene Chr6:139233159-139263026 (+)
A/J MGP_AJ_G0007077
 lincRNA gene Chr6:133765365-133791935 (+)
AKR/J MGP_AKRJ_G0007045
 lincRNA gene Chr6:137823182-137852783 (+)
BALB/cJ MGP_BALBcJ_G0007052
 lincRNA gene Chr6:133579146-133605952 (+)
C3H/HeJ MGP_C3HHeJ_G0006997
 lincRNA gene Chr6:137868198-137895422 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007217
 lincRNA gene Chr6:143010205-143046293 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006443
 lincRNA gene Chr6:132908067-132936457 (+)
CAST/EiJ MGP_CASTEiJ_G0006904
 lincRNA gene Chr6:137285323-137314878 (+)
CBA/J MGP_CBAJ_G0006977
 lincRNA gene Chr6:148352561-148381956 (+)
DBA/2J MGP_DBA2J_G0006999
 lincRNA gene Chr6:132615775-132643514 (+)
FVB/NJ MGP_FVBNJ_G0007022
 lincRNA gene Chr6:131528782-131555626 (+)
LP/J MGP_LPJ_G0007083
 lincRNA gene Chr6:139336416-139366505 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007002
 lincRNA gene Chr6:152386738-152427055 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007224
 lincRNA gene Chr6:137561959-137592181 (+)
PWK/PhJ MGP_PWKPhJ_G0006848
 lincRNA gene Chr6:131106804-131134969 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006758
 lincRNA gene Chr6:135740123-135773690 (+)
WSB/EiJ MGP_WSBEiJ_G0006964
 lincRNA gene Chr6:138193817-138227338 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    16
Sequences &
Gene Models
less
  • All Sequences
    39
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 381822 NCBI Gene Model | MGI Sequence Detail 22627 C57BL/6J ±  kb
transcript NR_037956 RefSeq | MGI Sequence Detail 607 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 4
Other
Accession IDs
less
MGI:2141379
References
more
  • Summaries
    All 19
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:248786 Paralkar VR, et al., Unlinking an lncRNA from Its Associated cis Element. Mol Cell. 2016 Apr 7;62(1):104-10
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory