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1700096J18Rik Gene Detail
Summary
  • Symbol
    1700096J18Rik
  • Name
    RIKEN cDNA 1700096J18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915177
    NCBI Gene: 67927
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:109237693-109244477 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 71.88 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    284 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915177
 lncRNA gene Chr11:109237665-109244477 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005304
 lincRNA gene Chr11:112897394-112905691 (+)
A/J MGP_AJ_G0005287
 lincRNA gene Chr11:108016573-108023235 (+)
AKR/J MGP_AKRJ_G0005266
 lincRNA gene Chr11:111248454-111255164 (+)
BALB/cJ MGP_BALBcJ_G0005269
 lincRNA gene Chr11:108446094-108453596 (+)
C3H/HeJ MGP_C3HHeJ_G0005218
 lincRNA gene Chr11:111557581-111564299 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005421
 lincRNA gene Chr11:116315521-116324102 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004812
 lincRNA gene Chr11:105245460-105253086 (+)
CAST/EiJ MGP_CASTEiJ_G0005165
 lincRNA gene Chr11:112677550-112685697 (+)
CBA/J MGP_CBAJ_G0005207
 lincRNA gene Chr11:121124008-121134166 (+)
DBA/2J MGP_DBA2J_G0005225
 lincRNA gene Chr11:107492866-107499710 (+)
FVB/NJ MGP_FVBNJ_G0005250
 lincRNA gene Chr11:106981626-106988273 (+)
LP/J MGP_LPJ_G0005306
 lincRNA gene Chr11:113310559-113317220 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005232
 lincRNA gene Chr11:120277479-120285176 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005425
 lincRNA gene Chr11:111815806-111824097 (+)
PWK/PhJ MGP_PWKPhJ_G0005114
 lincRNA gene Chr11:108653240-108660460 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005035
 lincRNA gene Chr11:111589173-111597706 (+)
WSB/EiJ MGP_WSBEiJ_G0005213
 lincRNA gene Chr11:111737026-111745117 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 67927 NCBI Gene Model | MGI Sequence Detail 6785 C57BL/6J ±  kb
transcript NR_027883 RefSeq | MGI Sequence Detail 454 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory