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Chid1 Gene Detail
Summary
  • Symbol
    Chid1
  • Name
    chitinase domain containing 1
  • Synonyms
    3110023E09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915288
    NCBI Gene: 68038
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:141073049-141119770 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 86.86 cM, cytoband F5
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1054 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915288
 protein coding gene Chr7:141073049-141119818 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033237
 protein coding gene Chr7:146686273-146734695 (-)
A/J MGP_AJ_G0033218
 protein coding gene Chr7:142492222-142540036 (-)
AKR/J MGP_AKRJ_G0033151
 protein coding gene Chr7:146442386-146493264 (-)
BALB/cJ MGP_BALBcJ_G0033219
 protein coding gene Chr7:142235250-142281135 (-)
C3H/HeJ MGP_C3HHeJ_G0032934
 protein coding gene Chr7:146180305-146230862 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033731
 protein coding gene Chr7:152038126-152086104 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030704
 protein coding gene Chr7:143700147-143744380 (-)
CAST/EiJ MGP_CASTEiJ_G0032264
 protein coding gene Chr7:138492507-138544584 (-)
CBA/J MGP_CBAJ_G0032906
 protein coding gene Chr7:157199121-157250930 (-)
DBA/2J MGP_DBA2J_G0033058
 protein coding gene Chr7:140436456-140483345 (-)
FVB/NJ MGP_FVBNJ_G0033011
 protein coding gene Chr7:140351082-140397375 (-)
LP/J MGP_LPJ_G0033153
 protein coding gene Chr7:148180113-148226539 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033044
 protein coding gene Chr7:157831546-157883283 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033750
 protein coding gene Chr7:145400914-145447644 (-)
PWK/PhJ MGP_PWKPhJ_G0031968
 protein coding gene Chr7:133720680-133768627 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031814
 protein coding gene Chr7:132233693-132282823 (-)
WSB/EiJ MGP_WSBEiJ_G0032374
 protein coding gene Chr7:146349598-146397608 (-)



Homology
more
  • Human Ortholog
    CHID1, chitinase domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CHID1, chitinase domain containing 1
  • Synonyms
    GL008, SI-CLP, SICLP
  • Links
    NCBI Gene ID: 66005
    neXtProt AC: NX_Q9BWS9
    UniProt: Q9BWS9

  • Chr Location
    11p15.5; chr11:867859-915214 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    12
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000025512 Ensembl Gene Model | MGI Sequence Detail 46722 C57BL/6J ±  kb
transcript ENSMUST00000166082 Ensembl | MGI Sequence Detail 4222 Not Applicable  
polypeptide ENSMUSP00000130360 Ensembl | MGI Sequence Detail 396 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 7
Other
Accession IDs
less
MGI:2142040
References
more
  • Summaries
    All 37
    Gene Ontology 5
    Phenotypes 12
  • Earliest
    J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory