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1700123O21Rik Gene Detail
Summary
  • Symbol
    1700123O21Rik
  • Name
    RIKEN cDNA 1700123O21 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915488
    NCBI Gene: 68238
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr16:5793451-5816360 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 2.71 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    764 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915488
 lncRNA gene Chr16:5793449-5816360 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036918
 sense intronic lncRNA gene Chr16:2549715-2573495 (+)
A/J MGP_AJ_G0036906
 sense intronic lncRNA gene Chr16:2343016-2365721 (+)
AKR/J MGP_AKRJ_G0036853
 sense intronic lncRNA gene Chr16:2544767-2568897 (+)
BALB/cJ MGP_BALBcJ_G0036897
 sense intronic lncRNA gene Chr16:2484538-2507552 (+)
C3H/HeJ MGP_C3HHeJ_G0036582
 sense intronic lncRNA gene Chr16:2567847-2590508 (+)
C57BL/6NJ MGP_C57BL6NJ_G0037410
 sense intronic lncRNA gene Chr16:2651408-2674327 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034470
 sense intronic lncRNA gene Chr16:2246051-2268787 (+)
CAST/EiJ MGP_CASTEiJ_G0035771
 sense intronic lncRNA gene Chr16:2580262-2604870 (+)
CBA/J MGP_CBAJ_G0036557
 sense intronic lncRNA gene Chr16:2799446-2828261 (+)
DBA/2J MGP_DBA2J_G0036734
 sense intronic lncRNA gene Chr16:2406800-2429480 (+)
FVB/NJ MGP_FVBNJ_G0036685
 sense intronic lncRNA gene Chr16:2408132-2430981 (+)
LP/J MGP_LPJ_G0036780
 sense intronic lncRNA gene Chr16:2520302-2542987 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036691
 sense intronic lncRNA gene Chr16:2612676-2636545 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037526
 sense intronic lncRNA gene Chr16:2515556-2539913 (+)
PWK/PhJ MGP_PWKPhJ_G0035465
 sense intronic lncRNA gene Chr16:2534869-2558225 (+)
SPRET/EiJ MGP_SPRETEiJ_G0035276
 sense intronic lncRNA gene Chr16:2590079-2620093 (+)
WSB/EiJ MGP_WSBEiJ_G0035971
 sense intronic lncRNA gene Chr16:2544523-2568633 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 68238 NCBI Gene Model | MGI Sequence Detail 22910 C57BL/6J ±  kb
transcript NR_045799 RefSeq | MGI Sequence Detail 675 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80182 Phan LK, et al., The mouse mahoganoid coat color mutation disrupts a novel C3HC4 RING domain protein. J Clin Invest. 2002 Nov;110(10):1449-59
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory