Zfp85os Gene Detail

Summary

• Symbol
  Zfp85os
• Name
  zinc finger protein 85, opposite strand
• Synonyms
  4930441O14Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1915521
  NCBI Gene: 68271
• Alliance
  gene page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr13:67877381-67904957 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 34.72 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  732 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1915521	antisense lncRNA gene	Chr13:67877325-67904957 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003194	antisense lncRNA gene	Chr13:67176050-67923772 (+)
A/J	MGP_AJ_G0003170	antisense lncRNA gene	Chr13:64727436-65507670 (+)
AKR/J	MGP_AKRJ_G0003152	antisense lncRNA gene	Chr13:66879844-67692567 (+)
BALB/cJ	MGP_BALBcJ_G0003157	antisense lncRNA gene	Chr13:65212347-66031974 (+)
C3H/HeJ	MGP_C3HHeJ_G0003113	antisense lncRNA gene	Chr13:66497555-67314888 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003301	antisense lncRNA gene	Chr13:70323920-70365386 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002828	antisense lncRNA gene	Chr13:62986033-63013509 (+)
CAST/EiJ	MGP_CASTEiJ_G0003081	antisense lncRNA gene	Chr13:65708768-66611040 (+)
CBA/J	MGP_CBAJ_G0003110	antisense lncRNA gene	Chr13:71995166-72916650 (+)
DBA/2J	MGP_DBA2J_G0003115	antisense lncRNA gene	Chr13:64618251-65389194 (+)
FVB/NJ	MGP_FVBNJ_G0003133	antisense lncRNA gene	Chr13:63650866-64403973 (+)
LP/J	MGP_LPJ_G0003191	antisense lncRNA gene	Chr13:67419288-68224601 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003124	antisense lncRNA gene	Chr13:70865382-71712174 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003302	antisense lncRNA gene	Chr13:66896917-66936887 (+)
PWK/PhJ	MGP_PWKPhJ_G0003038	antisense lncRNA gene	Chr13:64321669-64334388 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002984	antisense lncRNA gene	Chr13:63175988-63980742 (+)
WSB/EiJ	MGP_WSBEiJ_G0003114	antisense lncRNA gene	Chr13:67406363-67447844 (+)

Homology

• Gene Tree
  Zfp85os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  8
• Chemically induced (other)
  1
• Gene trapped
  7
• Genomic Mutations
  1 involving Zfp85os
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  10 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000044081 (Evidence)
• NCBI Gene
  68271

Representative Sequences			Length	Strain/Species
genomic	68271	NCBI Gene Model | MGI Sequence Detail	27577	C57BL/6J
transcript	NR_027969	RefSeq | MGI Sequence Detail	2908	C57BL/6
polypeptide	Q9CR93	UniProt | EBI | MGI Sequence Detail	105	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 7

  cDNA 7

References

• Summaries
  All 20

  Phenotypes 6
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Zfp85os:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120257	Chr13:67876855-67876885 (+)	-511 bp
Tssr120258	Chr13:67877350-67877363 (+)	-24 bp
Tssr120259	Chr13:67892318-67892327 (+)	14,942 bp
Tssr120260	Chr13:67892339-67892344 (+)	14,961 bp