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4930565N06Rik Gene Detail
Summary
  • Symbol
    4930565N06Rik
  • Name
    RIKEN cDNA 4930565N06 gene
  • Synonyms
    4930428L02Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915556
    NCBI Gene: 68306
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:36700881-36717551 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 26.20 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    474 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915556
 lncRNA gene Chr16:36700881-36717551 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003345
 antisense lncRNA gene Chr16:35302027-35319910 (-)
A/J MGP_AJ_G0003321
 antisense lncRNA gene Chr16:33561346-33577992 (-)
AKR/J MGP_AKRJ_G0003304
 antisense lncRNA gene Chr16:34844884-34861545 (-)
BALB/cJ MGP_BALBcJ_G0003310
 antisense lncRNA gene Chr16:33664891-33681594 (-)
C3H/HeJ MGP_C3HHeJ_G0003263
 antisense lncRNA gene Chr16:34961830-34978496 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003451
 antisense lncRNA gene Chr16:36144901-36161804 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002969
 antisense lncRNA gene Chr16:33926584-33943444 (-)
CAST/EiJ MGP_CASTEiJ_G0003227
 antisense lncRNA gene Chr16:35083428-35100093 (-)
CBA/J MGP_CBAJ_G0003260
 antisense lncRNA gene Chr16:37724282-37740948 (-)
DBA/2J MGP_DBA2J_G0003265
 antisense lncRNA gene Chr16:33456920-33473581 (-)
FVB/NJ MGP_FVBNJ_G0003284
 antisense lncRNA gene Chr16:33487140-33503781 (-)
LP/J MGP_LPJ_G0003338
 antisense lncRNA gene Chr16:35008164-35024830 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003273
 antisense lncRNA gene Chr16:36780767-36798260 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003454
 antisense lncRNA gene Chr16:34793123-34809789 (-)
PWK/PhJ MGP_PWKPhJ_G0003187
 antisense lncRNA gene Chr16:33857166-33874036 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003130
 antisense lncRNA gene Chr16:34710925-34727661 (-)
WSB/EiJ MGP_WSBEiJ_G0003261
 antisense lncRNA gene Chr16:34850313-34866996 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 68306 NCBI Gene Model | MGI Sequence Detail 16671 C57BL/6J ±  kb
transcript NR_040476 RefSeq | MGI Sequence Detail 2416 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:1921128
References
more
  • Summaries
    All 10
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory