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Zmym1 Gene Detail
Summary
  • Symbol
    Zmym1
  • Name
    zinc finger, MYM domain containing 1
  • Synonyms
    5830412B09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915560
    NCBI Gene: 68310
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:126940887-126954945 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 61.22 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    338 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915560
 protein coding gene Chr4:126940887-126954968 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028791
 protein coding gene Chr4:128774492-128789256 (-)
A/J MGP_AJ_G0028750
 protein coding gene Chr4:123700967-123715350 (-)
AKR/J MGP_AKRJ_G0028703
 protein coding gene Chr4:127097264-127111316 (-)
BALB/cJ MGP_BALBcJ_G0028773
 protein coding gene Chr4:124265698-124279827 (-)
C3H/HeJ MGP_C3HHeJ_G0028487
 protein coding gene Chr4:127170581-127184610 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029215
 protein coding gene Chr4:133662924-133676916 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026488
 protein coding gene Chr4:116814588-116827798 (-)
CAST/EiJ MGP_CASTEiJ_G0027920
 protein coding gene Chr4:125283397-125300370 (-)
CBA/J MGP_CBAJ_G0028453
 protein coding gene Chr4:136911076-136926309 (-)
DBA/2J MGP_DBA2J_G0028602
 protein coding gene Chr4:124139049-124153112 (-)
FVB/NJ MGP_FVBNJ_G0028569
 protein coding gene Chr4:122802320-122816764 (-)
LP/J MGP_LPJ_G0028703
 protein coding gene Chr4:129047396-129062737 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028595
 protein coding gene Chr4:141917000-141936246 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029253
 protein coding gene Chr4:127461367-127476563 (-)
PWK/PhJ MGP_PWKPhJ_G0027641
 protein coding gene Chr4:120637858-120651994 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027467
 protein coding gene Chr4:123285984-123299850 (-)
WSB/EiJ MGP_WSBEiJ_G0028000
 protein coding gene Chr4:127575715-127590587 (-)



Homology
more
  • Human Ortholog
    ZMYM1, zinc finger MYM-type containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZMYM1, zinc finger MYM-type containing 1
  • Synonyms
    MYM
  • Links
    NCBI Gene ID: 79830
    neXtProt AC: NX_Q5SVZ6
    UniProt: Q5SVZ6

  • Chr Location
    1p34.3; chr1:35032172-35118818 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    17
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043872 Ensembl Gene Model | MGI Sequence Detail 14059 C57BL/6J ±  kb
transcript ENSMUST00000055013 Ensembl | MGI Sequence Detail 3001 Not Applicable  
polypeptide ENSMUSP00000050669 Ensembl | MGI Sequence Detail 983 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    10 Sequences
  • InterPro Domains
    IPR025398 Domain of unknown function DUF4371
    IPR008906 HAT, C-terminal dimerisation domain
    IPR052958 Interferon-induced PKR regulator
    IPR012337 Ribonuclease H-like superfamily
    IPR011017 TRASH domain
    IPR010507 Zinc finger, MYM-type
    IPR051284 Zinc finger MYM-type/QRICH1
  • GlyGen
    Q3TJB1 1 site, 1 N-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140560
References
more
  • Summaries
    All 32
    Phenotypes 15
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory