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Bacc1 Gene Detail
Summary
  • Symbol
    Bacc1
  • Name
    BPTF associated chromatin complex component 1
  • Synonyms
    0610010K14Rik, 1110020A23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915609
    NCBI Gene: 104457
  • Alliance
    gene page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:70126032-70128740 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 42.99 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    73 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915609
 protein coding gene Chr11:70126030-70128808 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018587
 protein coding gene Chr11:70755738-70758454 (-)
A/J MGP_AJ_G0018555
 protein coding gene Chr11:68067053-68069769 (-)
AKR/J MGP_AKRJ_G0018524
 protein coding gene Chr11:70097537-70100250 (-)
BALB/cJ MGP_BALBcJ_G0018527
 protein coding gene Chr11:68389828-68392541 (-)
C3H/HeJ MGP_C3HHeJ_G0018340
 protein coding gene Chr11:70135899-70138616 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018978
 protein coding gene Chr11:72853839-72856557 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016624
 protein coding gene Chr11:64985586-64988285 (-)
CAST/EiJ MGP_CASTEiJ_G0017895
 protein coding gene Chr11:70381520-70384235 (-)
CBA/J MGP_CBAJ_G0018312
 protein coding gene Chr11:76164197-76166910 (-)
DBA/2J MGP_DBA2J_G0018422
 protein coding gene Chr11:67642813-67645524 (-)
FVB/NJ MGP_FVBNJ_G0018412
 protein coding gene Chr11:67298303-67301020 (-)
LP/J MGP_LPJ_G0018493
 protein coding gene Chr11:71325444-71328149 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018435
 protein coding gene Chr11:76732360-76735073 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019020
 protein coding gene Chr11:70369333-70372052 (-)
PWK/PhJ MGP_PWKPhJ_G0017669
 protein coding gene Chr11:68296763-68299474 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017459
 protein coding gene Chr11:70167221-70169935 (-)
WSB/EiJ MGP_WSBEiJ_G0017949
 protein coding gene Chr11:70032767-70035486 (-)



Homology
more
  • Human Ortholog
    BACC1, BPTF associated chromatin complex component 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    BACC1, BPTF associated chromatin complex component 1
  • Synonyms
    BAP18, C17orf49, HEPIS
  • Links
    NCBI Gene ID: 124944
    neXtProt AC: NX_Q8IXM2
    UniProt: Q8IXM2

  • Chr Location
    17p13.1; chr17:7014495-7017525 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    937
  • Tissues
    90
  • cDNA Data
    69
  • Literature Summary
    5
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020831 Ensembl Gene Model | MGI Sequence Detail 2709 C57BL/6J ±  kb
transcript ENSMUST00000108576 Ensembl | MGI Sequence Detail 576 Not Applicable  
polypeptide ENSMUSP00000104216 Ensembl | MGI Sequence Detail 191 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    8 Sequences
  • InterPro Domains
    IPR051754 Chromatin and ER Membrane Complex Protein
    IPR009057 Homeobox-like domain superfamily
    IPR001005 SANT/Myb domain
Molecular
Reagents
less
  • All nucleic 70
    cDNA 70

    Microarray probesets 4
Other
Accession IDs
less
MGI:1915782, MGI:2144361, MGI:2144443, MGI:7720808
References
more
  • Summaries
    All 41
    Developmental Gene Expression 5
    Gene Ontology 4
    Phenotypes 12
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory