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0610025J13Rik Gene Detail
Summary
  • Symbol
    0610025J13Rik
  • Name
    RIKEN cDNA 0610025J13 gene
  • Synonyms
    B430316H17Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915618
    NCBI Gene: 78687
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:98209635-98220028 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 45.60 cM, cytoband C6
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    399 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915618
 lncRNA gene Chr4:98209593-98220197 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003919
 antisense lncRNA gene Chr4:98474005-98484333 (+)
A/J MGP_AJ_G0003899
 antisense lncRNA gene Chr4:95045330-95055747 (+)
AKR/J MGP_AKRJ_G0003876
 antisense lncRNA gene Chr4:97357324-97367707 (+)
BALB/cJ MGP_BALBcJ_G0003885
 antisense lncRNA gene Chr4:95299612-95310005 (+)
C3H/HeJ MGP_C3HHeJ_G0003832
 antisense lncRNA gene Chr4:98151101-98161519 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004033
 antisense lncRNA gene Chr4:102246884-102258590 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003523
 antisense lncRNA gene Chr4:90446745-90457246 (+)
CAST/EiJ MGP_CASTEiJ_G0003796
 antisense lncRNA gene Chr4:95946333-95956588 (+)
CBA/J MGP_CBAJ_G0003825
 antisense lncRNA gene Chr4:105322898-105333290 (+)
DBA/2J MGP_DBA2J_G0003842
 antisense lncRNA gene Chr4:94811136-94821452 (+)
FVB/NJ MGP_FVBNJ_G0003860
 antisense lncRNA gene Chr4:93661161-93671598 (+)
LP/J MGP_LPJ_G0003921
 antisense lncRNA gene Chr4:98789586-98799854 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003848
 antisense lncRNA gene Chr4:111111346-111121666 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004028
 antisense lncRNA gene Chr4:97606881-97617189 (+)
PWK/PhJ MGP_PWKPhJ_G0003751
 antisense lncRNA gene Chr4:92955445-92965659 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003697
 antisense lncRNA gene Chr4:95061053-95070110 (+)
WSB/EiJ MGP_WSBEiJ_G0003831
 antisense lncRNA gene Chr4:97729738-97739976 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving 0610025J13Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    3
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046683 Ensembl Gene Model | MGI Sequence Detail 10394 C57BL/6J ±  kb
transcript ENSMUST00000180374 Ensembl | MGI Sequence Detail 713 Not Applicable  
polypeptide Q9CTM8 UniProt | EBI | MGI Sequence Detail 128 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 4
    Genomic 2
    cDNA 2

    Microarray probesets 1
Other
Accession IDs
less
MGI:1925937
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory