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Rbfa Gene Detail
Summary
  • Symbol
    Rbfa
  • Name
    ribosome binding factor A
  • Synonyms
    1110032A13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915981
    NCBI Gene: 68731
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:80235480-80243873 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 53.33 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    479 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915981
 protein coding gene Chr18:80235479-80243873 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024590
 protein coding gene Chr18:81099742-81108158 (-)
A/J MGP_AJ_G0024557
 protein coding gene Chr18:77544661-77553071 (-)
AKR/J MGP_AKRJ_G0024528
 protein coding gene Chr18:79869958-79878306 (-)
BALB/cJ MGP_BALBcJ_G0024555
 protein coding gene Chr18:77730780-77739190 (-)
C3H/HeJ MGP_C3HHeJ_G0024324
 protein coding gene Chr18:79954160-79962553 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025002
 protein coding gene Chr18:83182106-83190499 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022433
 protein coding gene Chr18:76401438-76409889 (-)
CAST/EiJ MGP_CASTEiJ_G0023797
 protein coding gene Chr18:80285911-80301664 (-)
CBA/J MGP_CBAJ_G0024294
 protein coding gene Chr18:86212060-86220453 (-)
DBA/2J MGP_DBA2J_G0024424
 protein coding gene Chr18:77098588-77106981 (-)
FVB/NJ MGP_FVBNJ_G0024390
 protein coding gene Chr18:76417600-76426489 (-)
LP/J MGP_LPJ_G0024508
 protein coding gene Chr18:80967655-80976071 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024420
 protein coding gene Chr18:87440546-87448956 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025051
 protein coding gene Chr18:80011226-80019589 (-)
PWK/PhJ MGP_PWKPhJ_G0023542
 protein coding gene Chr18:77489633-77508449 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023348
 protein coding gene Chr18:80190315-80199097 (-)
WSB/EiJ MGP_WSBEiJ_G0023859
 protein coding gene Chr18:79963356-79971797 (-)



Homology
more
  • Human Ortholog
    RBFA, ribosome binding factor A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RBFA, ribosome binding factor A
  • Synonyms
    C18orf22, HsT169
  • Links
    NCBI Gene ID: 79863
    neXtProt AC: NX_Q8N0V3
    UniProt: Q8N0V3

  • Chr Location
    18q23; chr18:80034389-80050651 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    52
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024570 Ensembl Gene Model | MGI Sequence Detail 8394 C57BL/6J ±  kb
transcript ENSMUST00000025462 Ensembl | MGI Sequence Detail 1377 Not Applicable  
polypeptide ENSMUSP00000025462 Ensembl | MGI Sequence Detail 350 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 52
    cDNA 52

    Microarray probesets 3
Other
Accession IDs
less
MGI:2147245
References
more
  • Summaries
    All 26
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory