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1110046J04Rik Gene Detail
Summary
  • Symbol
    1110046J04Rik
  • Name
    RIKEN cDNA 1110046J04 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1916058
    NCBI Gene: 68808
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:34120015-34144164 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 14.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    671 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916058
 lncRNA gene Chr13:34119550-34144174 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003181
 antisense lncRNA gene Chr13:32038882-32061320 (+)
A/J MGP_AJ_G0003155
 antisense lncRNA gene Chr13:31098363-31121038 (+)
AKR/J MGP_AKRJ_G0003137
 antisense lncRNA gene Chr13:31825163-31851128 (+)
BALB/cJ MGP_BALBcJ_G0003143
 antisense lncRNA gene Chr13:31175389-31197789 (+)
C3H/HeJ MGP_C3HHeJ_G0003099
 antisense lncRNA gene Chr13:31756506-31785164 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003287
 antisense lncRNA gene Chr13:33092300-33127982 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002815
 antisense lncRNA gene Chr13:29415136-29435359 (+)
CAST/EiJ MGP_CASTEiJ_G0003067
 antisense lncRNA gene Chr13:31420216-31460839 (+)
CBA/J MGP_CBAJ_G0003095
 antisense lncRNA gene Chr13:34543737-34571561 (+)
DBA/2J MGP_DBA2J_G0003101
 antisense lncRNA gene Chr13:30622045-30645313 (+)
FVB/NJ MGP_FVBNJ_G0003120
 antisense lncRNA gene Chr13:30200817-30225425 (+)
LP/J MGP_LPJ_G0003176
 antisense lncRNA gene Chr13:32263046-32288361 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003109
 antisense lncRNA gene Chr13:34757104-34790957 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003287
 antisense lncRNA gene Chr13:31482304-31508809 (+)
PWK/PhJ MGP_PWKPhJ_G0003025
 antisense lncRNA gene Chr13:30737623-30762413 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002970
 antisense lncRNA gene Chr13:30141740-30166838 (+)
WSB/EiJ MGP_WSBEiJ_G0003099
 antisense lncRNA gene Chr13:31842902-31871081 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1110046J04Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 68808 NCBI Gene Model | MGI Sequence Detail 24150 C57BL/6J ±  kb
transcript NR_040707 RefSeq | MGI Sequence Detail 777 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 18
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory