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Lrrn4cl Gene Detail
Summary
  • Symbol
    Lrrn4cl
  • Name
    LRRN4 C-terminal like
  • Synonyms
    1110067I12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916102
    NCBI Gene: 68852
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:8828132-8831273 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 5.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    153 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916102
 protein coding gene Chr19:8828132-8831273 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024815
 protein coding gene Chr19:6133723-6136847 (+)
A/J MGP_AJ_G0024783
 protein coding gene Chr19:5803243-5806367 (+)
AKR/J MGP_AKRJ_G0024758
 protein coding gene Chr19:5898304-5901428 (+)
BALB/cJ MGP_BALBcJ_G0024783
 protein coding gene Chr19:5908377-5911501 (+)
C3H/HeJ MGP_C3HHeJ_G0024549
 protein coding gene Chr19:5981581-5984705 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025230
 protein coding gene Chr19:6262691-6265815 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022659
 protein coding gene Chr19:6051830-6055216 (+)
CAST/EiJ MGP_CASTEiJ_G0024022
 protein coding gene Chr19:5626571-5630388 (+)
CBA/J MGP_CBAJ_G0024523
 protein coding gene Chr19:6372557-6375681 (+)
DBA/2J MGP_DBA2J_G0024650
 protein coding gene Chr19:5635784-5638908 (+)
FVB/NJ MGP_FVBNJ_G0024617
 protein coding gene Chr19:5708295-5711419 (+)
LP/J MGP_LPJ_G0024737
 protein coding gene Chr19:6023012-6026136 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024644
 protein coding gene Chr19:6238546-6241670 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025279
 protein coding gene Chr19:5938327-5941451 (+)
PWK/PhJ MGP_PWKPhJ_G0023767
 protein coding gene Chr19:5304572-5307745 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023572
 protein coding gene Chr19:5549921-5553374 (+)
WSB/EiJ MGP_WSBEiJ_G0024084
 protein coding gene Chr19:5908281-5911405 (+)



Homology
more
  • Human Ortholog
    LRRN4CL, LRRN4 C-terminal like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LRRN4CL, LRRN4 C-terminal like
  • Links
    NCBI Gene ID: 221091
    neXtProt AC: NX_Q8ND94
    UniProt: Q8ND94

  • Chr Location
    11q12.3; chr11:62686406-62689530 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Mice homozygous for a knock-out allele are viable and fertile and show no overt phenotypes.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    15
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68852 NCBI Gene Model | MGI Sequence Detail 3142 C57BL/6J ±  kb
transcript NM_001013019 RefSeq | MGI Sequence Detail 2600 C57BL/6  
polypeptide Q3TYX2 UniProt | EBI | MGI Sequence Detail 239 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 3
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:322410 van der Weyden L, et al., CRISPR activation screen in mice identifies novel membrane proteins enhancing pulmonary metastatic colonisation. Commun Biol. 2021 Mar 23;4(1):395
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory