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1500002C15Rik Gene Detail
Summary
  • Symbol
    1500002C15Rik
  • Name
    RIKEN cDNA 1500002C15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1916196
    NCBI Gene: 102636313
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:155817006-155819087 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 87.18 cM, cytoband E2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    125 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916196
 lncRNA gene Chr4:155817002-155819184 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004021
 antisense lncRNA gene Chr4:160087567-160089743 (-)
A/J MGP_AJ_G0004002
 antisense lncRNA gene Chr4:153350882-153353058 (-)
AKR/J MGP_AKRJ_G0003980
 antisense lncRNA gene Chr4:157516983-157519159 (-)
BALB/cJ MGP_BALBcJ_G0003988
 antisense lncRNA gene Chr4:153822577-153824753 (-)
C3H/HeJ MGP_C3HHeJ_G0003935
 antisense lncRNA gene Chr4:158065236-158067412 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004137
 antisense lncRNA gene Chr4:165770592-165772774 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003618
 antisense lncRNA gene Chr4:145637271-145639470 (-)
CAST/EiJ MGP_CASTEiJ_G0003898
 antisense lncRNA gene Chr4:155524587-155526764 (-)
CBA/J MGP_CBAJ_G0003928
 antisense lncRNA gene Chr4:170777550-170779726 (-)
DBA/2J MGP_DBA2J_G0003944
 antisense lncRNA gene Chr4:153370777-153372953 (-)
FVB/NJ MGP_FVBNJ_G0003963
 antisense lncRNA gene Chr4:152616076-152618252 (-)
LP/J MGP_LPJ_G0004024
 antisense lncRNA gene Chr4:160000586-160002768 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003951
 antisense lncRNA gene Chr4:173587381-173589557 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004131
 antisense lncRNA gene Chr4:158149901-158152077 (-)
PWK/PhJ MGP_PWKPhJ_G0003852
 antisense lncRNA gene Chr4:149509646-149511831 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003797
 antisense lncRNA gene Chr4:152402194-152404385 (-)
WSB/EiJ MGP_WSBEiJ_G0003934
 antisense lncRNA gene Chr4:158315906-158318082 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    29
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 102636313 NCBI Gene Model | MGI Sequence Detail 2082 C57BL/6J ±  kb
transcript NR_190173 RefSeq | MGI Sequence Detail 1536 C57BL/6  
polypeptide Q9DB92 UniProt | EBI | MGI Sequence Detail 155 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 13
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory